DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta7 and psmb4

DIOPT Version :9

Sequence 1:NP_649529.1 Gene:Prosbeta7 / 40639 FlyBaseID:FBgn0250746 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_005159798.1 Gene:psmb4 / 550499 ZFINID:ZDB-GENE-050417-333 Length:256 Species:Danio rerio


Alignment Length:263 Identity:114/263 - (43%)
Similarity:162/263 - (61%) Gaps:11/263 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NSLAQPMWQNGPAPGEFYNFTGGQTPVQQLPRELTTMGPYGTKHSTASSTTGTSVLGIRYDSGVM 70
            |.|....|:|||.||:||:|.|...        ....||  .||:.....|||||||:::..||:
Zfish     4 NGLKLNFWENGPKPGQFYSFPGSSA--------APACGP--IKHTLNPMVTGTSVLGVKFKGGVI 58

  Fly    71 LAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKMIEDQCCDDNIEMKPK 135
            :|||.|.||||:||::||.|:.|||.:.:||.|||:||.|.:|:.|:|.:|:::...|.....||
Zfish    59 IAADMLGSYGSLARFRNISRLMKVNNSTILGASGDYADYQYLKQIIEQMVIDEELLGDGHSYTPK 123

  Fly   136 SLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVDLRGRSYEDYVVATGFARHLAVPLV 200
            ::.||:|||:|||||:||||:..||:||..| |..:|..||..|.:||...|||||..:||.||:
Zfish   124 AIHSWLTRVMYNRRSKMNPLWNTVVIGGFYN-GESFLGYVDKLGVAYEAPTVATGFGAYLAQPLM 187

  Fly   201 REKKPKDRDFTAVEASELIRTCMEVLYYRDTRNISQYTVGVCSVNGCGVEGPFQVNENWTFAETI 265
            ||......:.|..||.|||..|::||||||.|:.:::.:.:.:.:|..:.||.....||..|..:
Zfish   188 REVIENKEEITKEEARELIERCLKVLYYRDARSYNRHEIAIVTADGVEIIGPLSSETNWDIAHLV 252

  Fly   266 KGY 268
            .|:
Zfish   253 SGF 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta7NP_649529.1 proteasome_beta_type_4 60..252 CDD:239729 88/191 (46%)
PRE1 60..232 CDD:223711 86/171 (50%)
psmb4XP_005159798.1 proteasome_beta_type_4 44..239 CDD:239729 92/195 (47%)
PRE1 44..233 CDD:223711 91/189 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590434
Domainoid 1 1.000 184 1.000 Domainoid score I3359
eggNOG 1 0.900 - - E1_KOG0185
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2090
Inparanoid 1 1.050 225 1.000 Inparanoid score I3489
OMA 1 1.010 - - QHG53720
OrthoDB 1 1.010 - - D1228942at2759
OrthoFinder 1 1.000 - - FOG0004376
OrthoInspector 1 1.000 - - oto40417
orthoMCL 1 0.900 - - OOG6_101718
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1012
SonicParanoid 1 1.000 - - X3101
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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