DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta7 and pre4

DIOPT Version :10

Sequence 1:NP_649529.1 Gene:Prosbeta7 / 40639 FlyBaseID:FBgn0250746 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_595308.1 Gene:pre4 / 2540875 PomBaseID:SPBC577.10 Length:262 Species:Schizosaccharomyces pombe


Alignment Length:216 Identity:83/216 - (38%)
Similarity:134/216 - (62%) Gaps:3/216 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 TGTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKM 120
            ||:|||.:::..|||:|||.|.||||:||:.::||:.||..|.::|..||.:|.|.|:|.:::..
pombe    42 TGSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQIQRLLEKLE 106

  Fly   121 IEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEG-TPYLANVDLRGRSYED 184
            |::....|...::|..:..::::|||.||::::|.:..::|.|||.|. .||:|..||||.:|..
pombe   107 IKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAFADLRGTTYSA 171

  Fly   185 YVVATGFARHLAVPLVREKKPKDR--DFTAVEASELIRTCMEVLYYRDTRNISQYTVGVCSVNGC 247
            ..:|||||.|||:|::|:....||  ..:...|...|..||.||:|||.|::::::|...:..|.
pombe   172 PAIATGFAMHLALPMLRKATDDDRWKTLSKESARATIDECMRVLFYRDARSLNKFSVATITPEGI 236

  Fly   248 GVEGPFQVNENWTFAETIKGY 268
            ..:....|:..|.|||...||
pombe   237 EFQTDQSVSSKWAFAEKQYGY 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta7NP_649529.1 proteasome_beta_type_4 60..252 CDD:239729 73/194 (38%)
pre4NP_595308.1 proteasome_beta_type_4 42..241 CDD:239729 76/198 (38%)

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