DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta7 and Psmb4

DIOPT Version :10

Sequence 1:NP_649529.1 Gene:Prosbeta7 / 40639 FlyBaseID:FBgn0250746 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_032971.2 Gene:Psmb4 / 19172 MGIID:1098257 Length:264 Species:Mus musculus


Alignment Length:257 Identity:105/257 - (40%)
Similarity:156/257 - (60%) Gaps:6/257 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 WQNGPAPGEFYNFTGGQTPVQQL-PRELTTMGPYGTKHSTASSTTGTSVLGIRYDSGVMLAADTL 76
            |..|||||:||....  ||...: |......||  ...:.....|||||||:::|.||::|||.|
Mouse    12 WAGGPAPGQFYRIPA--TPSGLMDPASAPCEGP--ITRTQNPMVTGTSVLGVKFDGGVVIAADML 72

  Fly    77 VSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKMIEDQCCDDNIEMKPKSLASWM 141
            .||||:||::||.|:.:||.:.:||.|||:||.|.:|:.:.|.:|:::...|.....|:::.||:
Mouse    73 GSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWL 137

  Fly   142 TRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVDLRGRSYEDYVVATGFARHLAVPLVREKKPK 206
            ||.:|:|||:||||:..:|:||. .:|..:|..||:.|.:||...:|||:..:||.||:||...|
Mouse   138 TRAMYSRRSKMNPLWNTMVIGGY-ADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEK 201

  Fly   207 DRDFTAVEASELIRTCMEVLYYRDTRNISQYTVGVCSVNGCGVEGPFQVNENWTFAETIKGY 268
            ....:..||.||:..||.||||||.|:.:::.:...:..|..:|||.....||..|..|.|:
Mouse   202 QPVLSQTEARELVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSAQTNWDIAHMISGF 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta7NP_649529.1 proteasome_beta_type_4 60..252 CDD:239729 81/191 (42%)
Psmb4NP_032971.2 proteasome_beta_type_4 52..247 CDD:239729 85/195 (44%)

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