DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta7 and pbs-7

DIOPT Version :9

Sequence 1:NP_649529.1 Gene:Prosbeta7 / 40639 FlyBaseID:FBgn0250746 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_492354.1 Gene:pbs-7 / 172674 WormBaseID:WBGene00003953 Length:236 Species:Caenorhabditis elegans


Alignment Length:218 Identity:70/218 - (32%)
Similarity:126/218 - (57%) Gaps:11/218 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 TGTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKM 120
            |||||:.::|.:||::..|.:||||.||||:|:.|.:|||.|:|:...||.||...::..|::::
 Worm    16 TGTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDNVLIAFGGDHADFHWLQNVIERQV 80

  Fly   121 IEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNE-------GTPYLANVDLR 178
            :..:..|.:|  .||:|..::|.:||.:|.:|||::..:||.||:.|       .||::..:..:
 Worm    81 LLWKRFDQDI--GPKALHGYLTSLLYAKRCKMNPVWNTLVVAGVEEEEKNNKETSTPFIGVITQK 143

  Fly   179 GRSYEDYVVATGFARHLAVPLVREK-KPKDRDFTAVEASELIRTCMEVLYYRDTRNISQYTVG-V 241
            |.:|:...:|||....|....|.:: :.|..|.:..||..::|..:|:..|.|....:::.:| |
 Worm   144 GCAYQVKHIATGLGAFLLNQAVEDEWRKKGEDLSREEAEAVLRKSLELTLYHDCVADNEFEIGRV 208

  Fly   242 CSVNGCGVEGPFQVNENWTFAET 264
            .:..|..:....::..:|:.|||
 Worm   209 DATEGVVLGKEEKIIGDWSIAET 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta7NP_649529.1 proteasome_beta_type_4 60..252 CDD:239729 62/200 (31%)
PRE1 60..232 CDD:223711 59/179 (33%)
pbs-7NP_492354.1 PRE1 16..221 CDD:223711 66/206 (32%)
proteasome_beta_type_4 16..218 CDD:239729 66/203 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164008
Domainoid 1 1.000 118 1.000 Domainoid score I3681
eggNOG 1 0.900 - - E1_KOG0185
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 122 1.000 Inparanoid score I3322
Isobase 1 0.950 - 0 Normalized mean entropy S1013
OMA 1 1.010 - - QHG53720
OrthoDB 1 1.010 - - D1228942at2759
OrthoFinder 1 1.000 - - FOG0004376
OrthoInspector 1 1.000 - - oto17820
orthoMCL 1 0.900 - - OOG6_101718
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1012
SonicParanoid 1 1.000 - - X3101
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.750

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