DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11999 and PMT4

DIOPT Version :9

Sequence 1:NP_649527.1 Gene:CG11999 / 40637 FlyBaseID:FBgn0037312 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_012677.1 Gene:PMT4 / 853608 SGDID:S000003904 Length:762 Species:Saccharomyces cerevisiae


Alignment Length:165 Identity:41/165 - (24%)
Similarity:68/165 - (41%) Gaps:30/165 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ATESNVVTCGSILKLLNSDYAFRLHSHDVKYG--------SGSGQQSVTGVEQKEDVNSHWVIKA 77
            :.:|..|....|:.:.:.|....||||..:|.        |.:||| |||... .|.|:.|.:..
Yeast   328 SVDSKTVNYFDIITIKHQDTDAFLHSHLARYPQRYEDGRISSAGQQ-VTGYTH-PDFNNQWEVLP 390

  Fly    78 QTGELCERGEPIACGSTVRLEHLSTKKNLHSHHFSSPL--SGEQEVSAYGTDGLGD--------- 131
            ..|....:|:.:.....:||.|::|...|.:|..:||.  :.|:..:....:|.|:         
Yeast   391 PHGSDVGKGQAVLLNQHIRLRHVATDTYLLAHDVASPFYPTNEEITTVTLEEGDGELYPETLFAF 455

  Fly   132 ----TGDHWEVVCSNENWMRSAHVRLRHIDTGMYL 162
                ..|...|:.|     ::...||.|:||.:.|
Yeast   456 QPLKKSDEGHVLKS-----KTVSFRLFHVDTSVAL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11999NP_649527.1 MIR 26..75 CDD:197746 18/56 (32%)
MIR 86..138 CDD:197746 13/66 (20%)
MIR 151..>182 CDD:197746 6/12 (50%)
PMT4NP_012677.1 PMT1 32..755 CDD:224839 41/165 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1928
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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