DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11999 and Pomt1

DIOPT Version :9

Sequence 1:NP_649527.1 Gene:CG11999 / 40637 FlyBaseID:FBgn0037312 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_445858.1 Gene:Pomt1 / 84430 RGDID:620078 Length:747 Species:Rattus norvegicus


Alignment Length:190 Identity:53/190 - (27%)
Similarity:73/190 - (38%) Gaps:56/190 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LHSHDVKY------GSGSG-QQSVTGVEQKEDVNSHWVIKAQTGELCERG----------EPIAC 91
            ||||...|      |.||. ||.||....| |:|:.|::|       :.|          .|:..
  Rat   341 LHSHKNTYPMIYENGRGSSHQQQVTCYPFK-DINNWWIVK-------DPGRHQLVVNNPPRPVRH 397

  Fly    92 GSTVRLEHLSTKKNLHSHHFSSPLS-GEQEVSAYGTDGLG---------------DTGDHWEVVC 140
            |..|:|.|..|.:.|::|..::||| ..||||.|....:.               ...|.|:.:.
  Rat   398 GDIVQLVHGMTTRLLNTHDVAAPLSPHSQEVSCYIDYNISMPAQNLWKLDIVNRESNQDTWKTIL 462

  Fly   141 SNENWMRSAHVRLRHIDTGMYLGMSGRSYGRPISG--QMEIVGVH---KPQHGTRWTTAE 195
            |        .||..|::|...|.:||...  |..|  |:|:||..   .|.....|...|
  Rat   463 S--------EVRFVHVNTSAILKLSGAHL--PDWGFRQLEVVGEKLSLGPHESMVWNVEE 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11999NP_649527.1 MIR 26..75 CDD:197746 16/37 (43%)
MIR 86..138 CDD:197746 19/77 (25%)
MIR 151..>182 CDD:197746 12/32 (38%)
Pomt1NP_445858.1 PMT1 22..742 CDD:224839 53/190 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1928
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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