DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11999 and pomt2

DIOPT Version :10

Sequence 1:NP_649527.1 Gene:CG11999 / 40637 FlyBaseID:FBgn0037312 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_001038498.1 Gene:pomt2 / 563878 ZFINID:ZDB-GENE-070112-1002 Length:756 Species:Danio rerio


Alignment Length:169 Identity:59/169 - (34%)
Similarity:85/169 - (50%) Gaps:15/169 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVGSISRGAATESNVVTCGSILKLLNSDYA-FRLHSHDVKY--GSGSGQQSVTGVEQKEDVNSHW 73
            |:|:....|:. ...:..||::.:.|...| ..||||...|  |.|:.||.||....| |.|:.|
Zfish   333 LIGNNPHNASM-PEYLAYGSVITVKNLRIAGGYLHSHWHLYPEGVGAHQQQVTAYLHK-DYNNLW 395

  Fly    74 VIKA--QTGELCERGEPIACGSTVRLEHLSTKKNLHSHHFSSPLSGEQ-EVSAYGTDGLGDTGDH 135
            ::|.  .:.:|....|.:..|..:||||..|.:|||||...:||:.:. :|:.||.:|.||..|.
Zfish   396 LVKRLDNSDDLTGSPELVRHGDIIRLEHKETTRNLHSHFHEAPLTKKHLQVTGYGINGSGDVNDL 460

  Fly   136 WEV-VCSNENW-----MRSAHVRLRHIDTGMYLGMSGRS 168
            |:| ||.....     :|| .||..|..||..|..||::
Zfish   461 WQVEVCGGRKGDPVKVLRS-KVRFLHRATGCVLCSSGKT 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11999NP_649527.1 beta-trefoil_MIR_SDF2_meta 27..201 CDD:467764 56/154 (36%)
pomt2NP_001038498.1 PMT 76..316 CDD:396786
beta-trefoil_MIR_POMT2 347..530 CDD:467753 56/154 (36%)
PMT_4TMC 549..752 CDD:465056
Blue background indicates that the domain is not in the aligned region.

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