DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11999 and sdf2

DIOPT Version :10

Sequence 1:NP_649527.1 Gene:CG11999 / 40637 FlyBaseID:FBgn0037312 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_001016483.1 Gene:sdf2 / 549237 XenbaseID:XB-GENE-489307 Length:218 Species:Xenopus tropicalis


Alignment Length:213 Identity:113/213 - (53%)
Similarity:147/213 - (69%) Gaps:6/213 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILLLTGLALVGSISRGAATESNVVTCGSILKLLNSDYAFRLHSHDVKYGSGSGQQSVTGVEQKED 68
            :|.:|.|.|..||    |:|.:||||||::||||..::.|||||||:|||||||||||||...:|
 Frog    12 LLFITPLLLPVSI----ASELSVVTCGSVVKLLNIKHSVRLHSHDVRYGSGSGQQSVTGVTSVDD 72

  Fly    69 VNSHWVIKAQTGELCERGEPIACGSTVRLEHLSTKKNLHSHHFSSPLSGEQEVSAYGTDGLGDTG 133
            .||:|.|:.||..:||||:.|.||.:|||.|::|.:|||||||:|||||.|||||:|.||.||..
 Frog    73 GNSYWRIRGQTSTVCERGKLIKCGQSVRLTHVNTGRNLHSHHFTSPLSGNQEVSAFGDDGEGDIL 137

  Fly   134 DHWEVVCSNENWMRSAHVRLRHIDTGMYLGMSGRSYGRPISGQMEIVGVHKPQHGTRWTTAEGLF 198
            |.|.|:|..|.|.|...||.||..|.::|.::|..|||||:||.|:.|:......:.|...||:|
 Frog   138 DDWTVLCGGEFWQRDDEVRFRHTSTSVFLSVTGEQYGRPINGQREVHGMSYANQNSYWKVMEGIF 202

  Fly   199 IVPKEKSSTHDEYAHSEL 216
            :.|.|:|.|.:  .|:||
 Frog   203 MKPSEQSRTQN--IHTEL 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11999NP_649527.1 beta-trefoil_MIR_SDF2_meta 27..201 CDD:467764 97/173 (56%)
sdf2NP_001016483.1 beta-trefoil_MIR_SDF2_meta 31..205 CDD:467764 97/173 (56%)

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