Sequence 1: | NP_649527.1 | Gene: | CG11999 / 40637 | FlyBaseID: | FBgn0037312 | Length: | 216 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524025.2 | Gene: | rt / 39297 | FlyBaseID: | FBgn0003292 | Length: | 886 | Species: | Drosophila melanogaster |
Alignment Length: | 232 | Identity: | 69/232 - (29%) |
---|---|---|---|
Similarity: | 99/232 - (42%) | Gaps: | 48/232 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 HILLLTGLALVGSISRGAATESNVVTCGSILKLLN-SDYAFR--------LHSHDVKY------- 51
Fly 52 -GSGSGQQSVTGVEQKEDVNSHWVIKAQTGE-LCERGEP--IACGSTVRLEHLSTKKNLHSHHFS 112
Fly 113 SPLSGE-QEVSAYGTDGLGDTGD-HWEVVCSNEN-----WMR-SAHVRLRHIDTGMYLGMSGRSY 169
Fly 170 GRPISGQMEIV-----GVHK------PQHGTRWTTAE 195 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG11999 | NP_649527.1 | MIR | 26..75 | CDD:197746 | 22/65 (34%) |
MIR | 86..138 | CDD:197746 | 17/55 (31%) | ||
MIR | 151..>182 | CDD:197746 | 12/35 (34%) | ||
rt | NP_524025.2 | PMT | 178..421 | CDD:280519 | |
PMT1 | 180..877 | CDD:224839 | 69/232 (30%) | ||
MIR | 452..508 | CDD:197746 | 19/57 (33%) | ||
MIR | 522..578 | CDD:197746 | 17/55 (31%) | ||
MIR | 586..642 | CDD:197746 | 14/55 (25%) | ||
PMT_4TMC | 672..875 | CDD:292810 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447170 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1928 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |