DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11999 and sdf2

DIOPT Version :9

Sequence 1:NP_649527.1 Gene:CG11999 / 40637 FlyBaseID:FBgn0037312 Length:216 Species:Drosophila melanogaster
Sequence 2:NP_956333.1 Gene:sdf2 / 336879 ZFINID:ZDB-GENE-030131-8823 Length:222 Species:Danio rerio


Alignment Length:196 Identity:95/196 - (48%)
Similarity:124/196 - (63%) Gaps:6/196 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TESNVVTCGSILKLLNSDYAFRLHSHDVKYGSGSGQQSVTGVEQKEDVNSHWVIKAQTGELCERG 86
            :|.|.|||||::||:|..:..|||||||:|||||||||||||...||.||:|.::..:...|.||
Zfish    27 SEMNCVTCGSVVKLINVKHNVRLHSHDVRYGSGSGQQSVTGVTTVEDSNSYWSVRGTSDHSCHRG 91

  Fly    87 EPIACGSTVRLEHLSTKKNLHSHHFSSPLSGEQEVSAYGTDGLGDTGDHWEVVCSNENWMRSAHV 151
            .|:.||..:||.|::|.:|||||:|:||||..|||||:|.:|.||..|.|.|:|....|.|...|
Zfish    92 TPVRCGQNIRLTHVNTGRNLHSHYFTSPLSSNQEVSAFGENGEGDHLDEWTVLCVGSIWQRDESV 156

  Fly   152 RLRHIDTGMYLGMSGRSYGRPISGQMEIVGVHKPQHGTRWTTAEGLFIVPKEKSS------THDE 210
            |.:|..|...|.::|..:||||.||.|:.|:......:.|.|.||:||.|.|..|      .|.|
Zfish   157 RFQHTATEALLSVTGEQFGRPIHGQREVHGMMVSSSHSYWRTMEGIFIKPSEAGSRDFHSPLHSE 221

  Fly   211 Y 211
            :
Zfish   222 F 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11999NP_649527.1 MIR 26..75 CDD:197746 33/48 (69%)
MIR 86..138 CDD:197746 29/51 (57%)
MIR 151..>182 CDD:197746 13/30 (43%)
sdf2NP_956333.1 MIR 32..80 CDD:197746 33/47 (70%)
MIR 91..146 CDD:197746 30/54 (56%)
MIR 155..200 CDD:197746 16/44 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 135 1.000 Domainoid score I4930
eggNOG 1 0.900 - - E1_COG1928
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5045
Inparanoid 1 1.050 218 1.000 Inparanoid score I3563
OMA 1 1.010 - - QHG54450
OrthoDB 1 1.010 - - D1534407at2759
OrthoFinder 1 1.000 - - FOG0002719
OrthoInspector 1 1.000 - - otm25698
orthoMCL 1 0.900 - - OOG6_102590
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2235
SonicParanoid 1 1.000 - - X2096
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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