DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11999 and Pomt2

DIOPT Version :10

Sequence 1:NP_649527.1 Gene:CG11999 / 40637 FlyBaseID:FBgn0037312 Length:216 Species:Drosophila melanogaster
Sequence 2:XP_011242390.2 Gene:Pomt2 / 217734 MGIID:2444430 Length:837 Species:Mus musculus


Alignment Length:232 Identity:45/232 - (19%)
Similarity:86/232 - (37%) Gaps:57/232 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 EDQDMLNCE------LHEERGWDKILSVEFSPDDSHLLVTGSRDQFRALTRDHEVLVFKIGEDSA 169
            |:.:|.|.|      |.||...|.:..:.:|.       .|:...:|.|...|..|:     |.:
Mouse    90 EESEMQNLEDEYDGVLREENVADALDGLGWSG-------RGTEQVYRNLNLSHCELI-----DVS 142

  Fly   170 SLRSFIDIDR-NMLATWFDN----SHFLY-MQSGGERDRMRIFMS---------SVNFSDEII-- 217
            .|..::.:.: |:.....::    |...| ::....::|:..|.:         .|:||...|  
Mouse   143 ILSGYVHLQKLNLSGNRIEDLSCVSCMPYLLELNASQNRLTTFFNFKPPQNLKQKVDFSSNQISE 207

  Fly   218 VYPILSFD---------------TKIVKILVAQHVSPRTRRITQIADQAQEEGKTLTQKLIDIGL 267
            :|.:.::.               |.:.|.:...|:|....|||.|....     ||..|::.:..
Mouse   208 MYDLSAYHTLTQLILDNNEIEEITGLEKCISLTHLSLAGNRITTIKGLG-----TLPIKVLSVSN 267

  Fly   268 ESGVDVTNMSELRAILDQETQCMPCYRLH--SHHDAI 302
            .....:|.:.||:|:.:.:........||  .:||.:
Mouse   268 NQIETITGLEELKALQNLDLSHNQISSLHGLENHDLL 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11999NP_649527.1 beta-trefoil_MIR_SDF2_meta 27..201 CDD:467764 19/101 (19%)
Pomt2XP_011242390.2 PMT 132..376 CDD:396786 33/183 (18%)
beta-trefoil_MIR_POMT2 407..593 CDD:467753
PMT_4TMC 612..833 CDD:465056
Blue background indicates that the domain is not in the aligned region.

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