DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17b1 and Timm23

DIOPT Version :9

Sequence 1:NP_649526.2 Gene:Tim17b1 / 40635 FlyBaseID:FBgn0037310 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_062225.1 Gene:Timm23 / 54312 RGDID:3863 Length:209 Species:Rattus norvegicus


Alignment Length:132 Identity:31/132 - (23%)
Similarity:50/132 - (37%) Gaps:23/132 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GREPCPFRIVEDCGGAFAMGALGGGAFQAIKGFRNAPSGLGYRLSGGLAAVRARS----GLVGGN 65
            ||....|..:..|       .:.|.||.|:.|.|     ||.:.:..:...:.|:    .:|...
  Rat    71 GRFELAFFTIGGC-------CMTGAAFGALNGLR-----LGLKETQSMPWSKPRNVQILNMVTRQ 123

  Fly    66 FAVWGAT-------FSAIDCSLVYFRKKEDPWNAIISGATTGGILAARTGLTSMLSSALVGGALL 123
            .|:|..|       :||....:...|..||.:|.:.:|..||.:.....||..:....|.|..|.
  Rat   124 GALWANTLGSLALLYSAFGVIIEKTRGAEDDFNTVAAGTMTGMLYKCTGGLRGIARGGLAGLTLT 188

  Fly   124 AL 125
            ::
  Rat   189 SV 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17b1NP_649526.2 Tim17 1..147 CDD:295283 31/132 (23%)
Timm23NP_062225.1 3a0801s02tim23 46..191 CDD:130056 31/132 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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