DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17b1 and Tim23

DIOPT Version :9

Sequence 1:NP_649526.2 Gene:Tim17b1 / 40635 FlyBaseID:FBgn0037310 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001015387.1 Gene:Tim23 / 3355096 FlyBaseID:FBgn0267976 Length:206 Species:Drosophila melanogaster


Alignment Length:110 Identity:26/110 - (23%)
Similarity:45/110 - (40%) Gaps:11/110 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 GALGG--GAFQAIKGFRNAPSGLGYRLSGGLAAVRARSGLVGGNFAVWGATFSAIDCSLVYFRKK 86
            |.:||  |.:..:|..:........|.:..|..:..:..............:||....|.:||.:
  Fly    84 GGIGGLAGVYNGLKVTKALEQKGKVRRTQLLNHIMKQGSGTANTLGTLTVLYSACGVLLQFFRGE 148

  Fly    87 EDPWNAIISGATTGGILAARTGLTSMLSSALVGGALLALIEGVGI 131
            :|..|.:|:|:.||.:..:..|    |.:...|||:     |:||
  Fly   149 DDHINTVIAGSATGLLYKSTAG----LRTCAFGGAI-----GLGI 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17b1NP_649526.2 Tim17 1..147 CDD:295283 26/110 (24%)
Tim23NP_001015387.1 Tim17 42..188 CDD:295283 26/110 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5596
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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