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Protein Alignment Tim17b1 and tctn-1
DIOPT Version :9
Sequence 1: | NP_649526.2 |
Gene: | Tim17b1 / 40635 |
FlyBaseID: | FBgn0037310 |
Length: | 179 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_500628.2 |
Gene: | tctn-1 / 184035 |
WormBaseID: | WBGene00017120 |
Length: | 470 |
Species: | Caenorhabditis elegans |
Alignment Length: | 169 |
Identity: | 30/169 - (17%) |
Similarity: | 62/169 - (36%) |
Gaps: | 26/169 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 MGALGGGAFQAIKGFRNAPSG---LGYRLSGGLAA-----VRARSGLVGGNFAVWGATFSAIDCS 79
:|...|.....:||....|.. ||...||.:|. :|:.|.: .|.|.|:|.
Worm 259 VGYKAGEQTYRVKGSIPVPFAVPTLGNCYSGSIAPSPVFFLRSMSSV---------CTISTINCE 314
Fly 80 LVYFRKK---EDPWNAIISGATTGGILAARTGLTSMLSSALVGGALLALIEGVGIVVSHY----S 137
....:.: |..:.:::..:.:.....|..|..::....|....:...:....::..:| |
Worm 315 DARAKARAFYEQVYPSVLVSSPSEDAHPASVGRVNVTWEELSPSTISCRLPVSSLLQIYYSKQGS 379
Fly 138 ADSYRQVSPVERQQRYKQEL--LRQQKGVSPLAATYGEI 174
..:||:|......|....:: |..|:...|::.::.|:
Worm 380 TKNYREVIIAGNSQLLLDDVPYLSGQEIRMPISISFTEV 418
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Tim17b1 | NP_649526.2 |
Tim17 |
1..147 |
CDD:295283 |
25/138 (18%) |
tctn-1 | NP_500628.2 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5596 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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