DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17b1 and timm-23

DIOPT Version :9

Sequence 1:NP_649526.2 Gene:Tim17b1 / 40635 FlyBaseID:FBgn0037310 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_492953.1 Gene:timm-23 / 173041 WormBaseID:WBGene00008857 Length:242 Species:Caenorhabditis elegans


Alignment Length:141 Identity:40/141 - (28%)
Similarity:58/141 - (41%) Gaps:28/141 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FAMGALG---GGAFQAIKGFRNAPSGLGYRLSGGLAAVRARSGLV---------GGNFA-VWGA- 71
            ||:|.:|   ||||    |...|...||..::.....:..:..:.         |..|| ..|| 
 Worm   108 FALGHIGWAVGGAF----GVGCARGALGELMNPETRKMVGKPWMTRMVNATMKHGSGFAQPSGAI 168

  Fly    72 --TFSAIDCSLVYFRKKEDPWNAIISGATTGGILAARTGLTSMLSSALVGGALLALIEGVGIVVS 134
              .:||::..|...| .||..|...:||.||.|..:..||.:....||||       .|:....:
 Worm   169 VFMYSALEIGLRSVR-AEDELNGFGAGALTGAIYRSPHGLKASGVGALVG-------LGIAAAWT 225

  Fly   135 HYSADSYRQVS 145
            ..|.||.:::|
 Worm   226 LSSTDSRQRLS 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17b1NP_649526.2 Tim17 1..147 CDD:295283 40/141 (28%)
timm-23NP_492953.1 Tim17 109..226 CDD:280604 35/128 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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