DRSC/TRiP Functional Genomics Resources

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Protein Alignment chia.1 and Cht10

DIOPT Version :10

Sequence 1:NP_998215.1 Gene:chia.1 / 406323 ZFINID:ZDB-GENE-040426-1994 Length:455 Species:Danio rerio
Sequence 2:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster


Alignment Length:398 Identity:146/398 - (36%)
Similarity:224/398 - (56%) Gaps:30/398 - (7%)


- Green bases have known domain annotations that are detailed below.


Zfish    20 SSTKLVCYMTNWSQYRPGNGKFLPENIDPFLCTHVVYALATISYDNQI--TTIEWNDVD--LYKS 80
            |..|::||.|||:.||.|.|:|.|::|:..|||||:|..|.:.|...:  |...|.||:  .|..
  Fly   963 SHYKVICYFTNWAWYRKGIGRFTPDDINTELCTHVIYGFAVLDYSELVLRTHDSWADVENNFYTR 1027

Zfish    81 MNELKKVNPALKTQLSVGGLVNGV-SPYINMVATPENRKAFIRNALLFLRLHEFDGMDIDWQYP- 143
            :..||  :..:|..|::||..:.. ..|..:|.:|..|..|:|:||.|:..:.|:|:|:||:|| 
  Fly  1028 VTSLK--SKGIKVSLALGGWNDSQGDKYSRLVRSPMARSRFVRHALEFIEKYGFEGLDLDWEYPV 1090

Zfish   144 ----GHNGSPPQDKQRLTTFIKEMRDAIEQEAIDTKKTPLLLSIKVSAIKTTIENAYEAKEVASL 204
                ..|....::|...|.:::|:.:|.....       |:||..||..:..|:..|:..:::..
  Fly  1091 CWQTECNKGSTEEKDGFTAWVQELSEAFRPRG-------LMLSTAVSPSRKIIDAGYDIPQLSRY 1148

Zfish   205 VDFVTIMSYDYHGHWDPITGHNSPLFRSSFDTGSIVHHNINSSLEFWLGSGAPADRLLLGLPTYG 269
            .|::.:|:||:|||||..|||.:||:....|  ...:.|:|.|:.:|:..|||:.:|::|:|.||
  Fly  1149 FDWIAVMTYDFHGHWDKKTGHVAPLYHHPDD--DFEYFNVNYSINYWMEKGAPSQKLVMGIPLYG 1211

Zfish   270 RTFML-STSQTGLGAPANGPADAGPYTREAGFWSYYEICP---MESSVPIHWIDE--QMVPYAVQ 328
            ::|.| :|:.:||.|.|..|.:||.:||.|||.:|||||.   .:....:|  ||  :|.|||.:
  Fly  1212 QSFTLENTNSSGLNAKAPAPGEAGEFTRAAGFLAYYEICERVNRQGWQVVH--DEFGRMGPYAYK 1274

Zfish   329 GRAWVGFDNQESITAKVQWLNSLKLGGASVWTLDFDDFAGRFCYNGAYPLVNHLRNSLGFPPKPT 393
            |..||.:|:.:.:..|...:.||||||..||.||.|||..| |.||.:||:..:.|.|..||...
  Fly  1275 GTQWVSYDSPDMVRKKSLLVRSLKLGGGMVWALDLDDFKNR-CGNGVHPLLTEIHNVLKDPPSLM 1338

Zfish   394 TTPRPTTT 401
            ..|.|..|
  Fly  1339 EIPGPIET 1346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chia.1NP_998215.1 GH18_chitolectin_chitotriosidase 24..386 CDD:119351 138/377 (37%)
ChtBD2 407..455 CDD:214696
Cht10NP_001036422.1 GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:426342
CBM_14 875..918 CDD:426342
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351 138/377 (37%)
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351
ChtBD2 1834..1871 CDD:214696
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
Blue background indicates that the domain is not in the aligned region.

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