DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17a2 and TIM23

DIOPT Version :9

Sequence 1:NP_649524.1 Gene:Tim17a2 / 40632 FlyBaseID:FBgn0037307 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_014414.3 Gene:TIM23 / 855751 SGDID:S000005300 Length:222 Species:Saccharomyces cerevisiae


Alignment Length:124 Identity:26/124 - (20%)
Similarity:57/124 - (45%) Gaps:13/124 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GCAFMMGTMGGSLFQYLKGFRNAP--SGLRRGLHGGIESVRLRTPAIAGSFAIWGATFSTVDCVM 79
            |..:::|...|.....::|.:|.|  |..:..|:..:..:..|.|.:..:..|...:::.::..:
Yeast   102 GAVYLLGLGIGGFSGMMQGLQNIPPNSPGKLQLNTVLNHITKRGPFLGNNAGILALSYNIINSTI 166

  Fly    80 VSYRQREDSWNAIVSGAATGGILAARNGIRAMANSAFVGCLVLAMLEGAGAAVATIYAS 138
            .:.|.:.|:..:|.:||.||.:..:..|::.|..|:       ||:    ||...::.|
Yeast   167 DALRGKHDTAGSIGAGALTGALFKSSKGLKPMGYSS-------AMV----AAACAVWCS 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17a2NP_649524.1 Tim17 2..>129 CDD:295283 23/113 (20%)
TIM23NP_014414.3 3a0801s02tim23 61..212 CDD:130056 25/120 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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