DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17a2 and TIM17-3

DIOPT Version :9

Sequence 1:NP_649524.1 Gene:Tim17a2 / 40632 FlyBaseID:FBgn0037307 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_196730.1 Gene:TIM17-3 / 831041 AraportID:AT5G11690 Length:133 Species:Arabidopsis thaliana


Alignment Length:115 Identity:48/115 - (41%)
Similarity:73/115 - (63%) Gaps:2/115 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RIVEDCGCAFMMGTMGGSLFQYLKGFRNAPSGLRRGLHGGIESVRLRTPAIAGSFAIWGATFSTV 75
            |||...|.||..|.:|||::.:::|..|:|.|.|  ..||.::..:..|.:.|:||::|...||.
plant    14 RIVNAIGYAFGAGAVGGSVYHFVRGAYNSPIGAR--YVGGTQAASMNAPRLGGTFAVFGGLLSTF 76

  Fly    76 DCVMVSYRQREDSWNAIVSGAATGGILAARNGIRAMANSAFVGCLVLAML 125
            |..:|..|::||.||:||:||||||:|:.|.|:.|.:.||.:....||:|
plant    77 DYALVRIRKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVMFGFFLAVL 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17a2NP_649524.1 Tim17 2..>129 CDD:295283 48/115 (42%)
TIM17-3NP_196730.1 Tim17 13..>126 CDD:413300 47/113 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 130 1.000 Domainoid score I1702
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1590221at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10485
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.880

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