DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17a2 and timm23a

DIOPT Version :9

Sequence 1:NP_649524.1 Gene:Tim17a2 / 40632 FlyBaseID:FBgn0037307 Length:224 Species:Drosophila melanogaster
Sequence 2:XP_009305093.1 Gene:timm23a / 798429 ZFINID:ZDB-GENE-020419-17 Length:232 Species:Danio rerio


Alignment Length:137 Identity:35/137 - (25%)
Similarity:51/137 - (37%) Gaps:40/137 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 TMGG----------------SLFQYLKG---FRNAPSGLRRGLHGGIESVR------LRTPAIAG 63
            |:||                ||| .|.|   |:.|..|...||..|:...|      .|...|..
Zfish    79 TIGGCCITGKTFFVVLINRLSLF-ILTGACFFKGAAFGTLNGLRMGLSETRDMPWSKPRNVQILN 142

  Fly    64 SFAIWGATF-STVDCVMVSY----------RQREDSWNAIVSGAATGGILAARNGIRAMANSAFV 117
            .....||:: :|:..|.:.|          |..||..|.:.:|..||.:..:..|::.:|....:
Zfish   143 MVTRQGASWANTLGSVALLYSVFGVAIEKARGAEDDLNTVAAGTLTGMVFKSTGGLKGVARGGLI 207

  Fly   118 GCLVLAM 124
            |   |||
Zfish   208 G---LAM 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17a2NP_649524.1 Tim17 2..>129 CDD:295283 35/137 (26%)
timm23aXP_009305093.1 Tim17 46..215 CDD:295283 35/137 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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