DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tim17a2 and Timm22

DIOPT Version :9

Sequence 1:NP_649524.1 Gene:Tim17a2 / 40632 FlyBaseID:FBgn0037307 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_116007.1 Gene:Timm22 / 79463 RGDID:68406 Length:192 Species:Rattus norvegicus


Alignment Length:130 Identity:37/130 - (28%)
Similarity:57/130 - (43%) Gaps:35/130 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RIVEDCGCAFMMGTMGGSLFQYLKGFRNAPSGLRRGLHGGIES-------VRLRTP--------- 59
            |.:|.|....::..:||.:.....|...|          ||::       ...|||         
  Rat    62 RAMESCAFKAVLACVGGFVLGGAFGVFTA----------GIDTNVGFDPKDPYRTPTAREVLKDM 116

  Fly    60 -----AIAGSFAIWGATFSTVDCVMVSYRQREDSWNAIVSGAATGGILAARNGIRAMANSAFVGC 119
                 :.|.:|||.||.||..:|::.|||.:.|..|:::||..|||.:..|.|::|.|    :||
  Rat   117 GQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGVKAGA----IGC 177

  Fly   120  119
              Rat   178  177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17a2NP_649524.1 Tim17 2..>129 CDD:295283 37/130 (28%)
Timm22NP_116007.1 Tim17 67..184 CDD:396842 35/125 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5596
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.