DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim17a2 and Tim17a1

DIOPT Version :9

Sequence 1:NP_649524.1 Gene:Tim17a2 / 40632 FlyBaseID:FBgn0037307 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_001287301.1 Gene:Tim17a1 / 41500 FlyBaseID:FBgn0038018 Length:222 Species:Drosophila melanogaster


Alignment Length:235 Identity:151/235 - (64%)
Similarity:182/235 - (77%) Gaps:26/235 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEYNRQPCPIRIVEDCGCAFMMGTMGGSLFQYLKGFRNAPSGLRRGLHGGIESVRLRTPAIAGSF 65
            ||||||||||||||||||||||||:|||||::||||||||:||:|.|:|||:.|::|||:|||||
  Fly     1 MEYNRQPCPIRIVEDCGCAFMMGTIGGSLFEFLKGFRNAPTGLQRRLYGGIDLVKMRTPSIAGSF 65

  Fly    66 AIWGATFSTVDCVMVSYRQREDSWNAIVSGAATGGILAARNGIRAMANSAFVGCLVLAMLEGAGA 130
            |:||||||||||.:|.||||||:||:|:||||||||||||||||||||||.||||||||:|||||
  Fly    66 AVWGATFSTVDCALVHYRQREDAWNSILSGAATGGILAARNGIRAMANSALVGCLVLAMIEGAGA 130

  Fly   131 AVATIYASDGGVKAEESLITVDQQMQRPQWE-----------TSVADSNLTGAELERVLDECRAY 184
            |||||.|:|.|..     |.:  :.||.|||           :|..|..|  ||.|||||:|||.
  Fly   131 AVATINAADKGAG-----IVI--KPQRAQWEAILETIDPKRASSTQDFAL--AEFERVLDKCRAS 186

  Fly   185 RAHNKMQQ-PMRSDAVEGKELGQLMKPMHSLVDLVKLAEI 223
            |..|.:|. |::|...:.|:     ||.:||:|||||:::
  Fly   187 REPNLLQDIPVKSHERDSKQ-----KPFYSLLDLVKLSQM 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim17a2NP_649524.1 Tim17 2..>129 CDD:295283 105/126 (83%)
Tim17a1NP_001287301.1 Tim17 2..138 CDD:295283 113/135 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456964
Domainoid 1 1.000 130 1.000 Domainoid score I1702
eggNOG 1 0.900 - - E1_COG5596
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 168 1.000 Inparanoid score I1558
Isobase 1 0.950 - 0 Normalized mean entropy S575
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1590221at2759
OrthoFinder 1 1.000 - - FOG0001103
OrthoInspector 1 1.000 - - mtm1125
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10485
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X753
1110.850

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