DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1113 and Fam161a

DIOPT Version :9

Sequence 1:NP_001262277.1 Gene:CG1113 / 40629 FlyBaseID:FBgn0037304 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_017454620.1 Gene:Fam161a / 289833 RGDID:1304999 Length:653 Species:Rattus norvegicus


Alignment Length:591 Identity:122/591 - (20%)
Similarity:208/591 - (35%) Gaps:186/591 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LAKFYDSIPDYRDVKHLHRVEFYSTLESLRSTSR-ELRSQAATAPTVERSASVSSCSVGHGKSKK 126
            |.|.|......:|::.....:..|:..|.:|.|. .|.:.:.:.|.::||:|:|:      .:.:
  Rat    71 LEKMYQDKLTMKDIQAALVGDDSSSSASEKSCSHPALSATSLSEPDLDRSSSLST------TTDE 129

  Fly   127 RPSKGKKIKKRPLVLDPVPPPAILVIPGQ-QDRCATRPVVHTPNSSCLSDEYDQCLRDLSRLKSF 190
            .|...||                  .||: ..|...:.:::...:....::|.|...||...|..
  Rat   130 LPDLEKK------------------TPGEIGTRSYAKELINNMWNDFSVEDYTQYDSDLQTAKKN 176

  Fly   191 KE-------------DFAVEVADFKRSLKSFEAEFRRPKSTSSNGTQTQTNKQ------------ 230
            ::             .|.:.|.:.||..|:.:|:..|.|....|....:..|:            
  Rat   177 RKKPKAWTPRITVPVPFEMTVREQKRREKASDAQETREKMLKRNEDDAECKKKFRANPVPSRLLL 241

  Fly   231 -------SQTQNRCQKT------------------ANPGQHTAERAKCRREMLRRCFSVNDLQGI 270
                   .|.:.|.:||                  |...|..|.|.|..||:.|           
  Rat   242 PLYEDLVKQNEERRKKTRERSKAALLASQKPFKFIAREEQKQAIREKKLRELCR----------- 295

  Fly   271 ALEAHSKPSKL-AQPA-RSNYFPLS----KQEEI-------PKIQ--IQS---PTTSSKRS-SSA 316
               |..||.:. |:|. |..|.|.:    |:||:       ||.:  :||   |:.|:.|: ...
  Rat   296 ---AKKKPKQFKARPVPRFIYRPPANVKPKREELYGDSRTQPKARDVLQSSPWPSHSTYRAFRDP 357

  Fly   317 SSAARGRGR-RGRVRKPKPGSSVKDEKPLPPLS------------IYE----------------L 352
            .|.|..||: |.|...|......|.::|....|            :||                :
  Rat   358 RSPAMPRGKHRHRRLSPSDQGLEKWKEPFSEQSFRNCPVLCDQCCLYESLCDSNKRQKILADIRM 422

  Fly   353 PEEPV-QRRTPSVSPLHPVSRPNLAATLRAEVSRKKVKELKNNCTYHDPRPQFDWEVRKTPAWKS 416
            .||.: :.|.|:.||.|...|.:..|:.|.             |.|..|.|......|:....||
  Rat   423 GEEILKETRRPNPSPRHKSPRRSAHASARP-------------CEYSPPMPTASSRGREQAIRKS 474

  Fly   417 LS----LNESHKALLSIRLATRKAEQAFQERQYELHMEMMRQRVKSAPLLLEGPTFWGPE--VGK 475
            |.    |.|....:|:      |.:|..::.|     :::..|||:          :|.:  :.:
  Rat   475 LEEKKMLEEERNRILT------KQKQRMRDLQ-----KLLATRVKA----------YGSQQSLSQ 518

  Fly   476 LTHTCRTEELRHSCEGSRQRRKKKSEFPVPDADTKLQQLRKVYG--SEKSCSRQSQRSKRSERRP 538
            |..: |..:||.    |.:.|.|:....:.:.|.|||:...::.  |:|:....::|...:..:.
  Rat   519 LVKS-RVTDLRR----SEKARMKEYWQELEEQDKKLQKRPMLFERVSQKNARLAAERCYSNTLKA 578

  Fly   539 QGLTTE 544
            .||:.|
  Rat   579 LGLSEE 584



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28J06
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003802
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.900

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