DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1113 and fam161b

DIOPT Version :9

Sequence 1:NP_001262277.1 Gene:CG1113 / 40629 FlyBaseID:FBgn0037304 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_002938640.2 Gene:fam161b / 100492844 XenbaseID:XB-GENE-991869 Length:565 Species:Xenopus tropicalis


Alignment Length:529 Identity:103/529 - (19%)
Similarity:187/529 - (35%) Gaps:133/529 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 ISQPE-AETPAWSSQM-GVRSLAKFYDSIPDYRDVKHLHRVEFYSTLESLRSTSRELRSQ----- 101
            |..|: .::..|::|: |..:|......:.||.|    |..:.|::.:.|:...:.|:.:     
 Frog    15 IGNPQHLDSMDWNNQVNGTENLFSRVAKLMDYVD----HEEDNYNSEQDLQEKLQALKIRNGLYL 75

  Fly   102 -------AATAPTVERS---------ASVSSCS-------VGHGKSKKRPSKGKKIKKRPLVLDP 143
                   .|.:.|.:.|         |:..:|:       ......:|.| |.|:..|.......
 Frog    76 SELNSLYQAYSKTSQTSKDFALEDIFANNETCNRVPKSLKASDNVEQKAP-KSKEATKAHDFEVT 139

  Fly   144 VPPPAILVIPGQQDRCATRPVVHTPNSSCLSDEY--DQCLRDLSRLKSFKE------------DF 194
            ||.|..:.:     |.|.|.:....::.|..|..  .:.:.|...||.|:.            |.
 Frog   140 VPRPFQMTL-----READRKIKLNLDAFCNMDTTIDTESMEDPECLKQFRAQPVPSKVFMPLYDE 199

  Fly   195 AVEVADFKRS---LKSFEAEFRRPKSTSSNGTQTQTNKQSQTQNRCQKTANPGQHTAERAKCRRE 256
            .||..:.||.   ||..|......|.......:.:..|::..::   :||.|||...:|.||.  
 Frog   200 LVEEHEAKRKAHILKRKELLLSTQKPFRFLTKEEERKKKTVLRS---ETAPPGQQQQQRIKCN-- 259

  Fly   257 MLRRCFSVNDLQGIALEAHSKPSKLAQPARSNYFPLSKQEEIPKIQIQSPTTSSKRSSSASSAAR 321
                  |...:...||....|.::|.:...|.   :..::.:.......|.|..:|....|:..:
 Frog   260 ------SYRTILDPALSDKLKETELLRKINSQ---IRAKDMLENSAAPIPVTRRERDPQTSTLLK 315

  Fly   322 ------GRGRRGRVRKPKPGSSVKDEKPL--------------------PPLSIY--ELPEEPVQ 358
                  |..::....:|...::|.|.:.|                    .|.:::  ...|:..|
 Frog   316 TKQEHLGYLQQNLTFQPNINTAVPDFQKLYKMFQRESLLNQNVKEPTRNKPFTLHTSRRSEQRKQ 380

  Fly   359 RRTP------SVSPLHPVSRPNLA-------------ATLRAEVSRKKVKELKNNCTYHDPRPQF 404
            |:||      |.:|...:|..:|:             :|.|.:::.:...|.|    :|......
 Frog   381 RQTPMEASADSKTPSRSISNMDLSSLSLNTLPVYITDSTNRRKLAIRSSLEEK----HHQNTKSA 441

  Fly   405 DW--EVRKTPAWKSLSLNESHKAL---LSI------RLATRKAEQAFQERQYELHMEMMRQRVKS 458
            :|  :.:|.......||:...|||   ||:      :|...:.....:.::|...:|.|:.|||.
 Frog   442 EWSKKQKKKGQLTQRSLSRRAKALDPHLSLADTIKDKLNYNRQSDLRRAKEYREELEQMKSRVKE 506

  Fly   459 APLLLEGPT 467
            .|.|.|..|
 Frog   507 RPYLFEHVT 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1113NP_001262277.1 None
fam161bXP_002938640.2 UPF0564 136..497 CDD:402296 71/383 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003802
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6399
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

Return to query results.
Submit another query.