DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1113 and fam161a

DIOPT Version :9

Sequence 1:NP_001262277.1 Gene:CG1113 / 40629 FlyBaseID:FBgn0037304 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001119995.1 Gene:fam161a / 100144951 XenbaseID:XB-GENE-5821022 Length:659 Species:Xenopus tropicalis


Alignment Length:675 Identity:138/675 - (20%)
Similarity:233/675 - (34%) Gaps:207/675 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SCVKVPIDPCNNCPAPVYNRPKLSSLGGKKPTDQAHIS-----QPEAETPA-------WSSQMGV 60
            :||:.|::|....|..:|.|    .||.::....|.:|     :....|||       |......
 Frog    13 ACVRTPVNPYTKAPLALYER----ELGERQQQRTASVSPQRLPRTSMGTPAAPAAALDWEEARCC 73

  Fly    61 RSLAKFYDSIPDYRDVKHLHRVEFYSTLESLRSTSRELRSQAATAPTVERSASVSSCSVGHGKSK 125
            :| .:..|.:.|...|.|..: ::|..:|.|:..  .|::........::...:|      |...
 Frog    74 KS-RRCQDWVFDISKVHHPDK-DYYVQVEKLKKA--HLQNMEQLEKMYDKKLHLS------GVHN 128

  Fly   126 KRPSKGKKIKKRPLVLDPVPPPAILVIPGQQDRCATRPVVHTPNSSCLSD-------------EY 177
            ....:|   ..|.:......|.::|  |.:.|....:..:....|..||:             |:
 Frog   129 PENEQG---VVREVYRSAWEPKSVL--PAEYDDKYLKHSLSGSVSPSLSESSHESTNGDSSDSEH 188

  Fly   178 DQCLRD--LSRLKSF--------KEDFAVEVADFKRSLKS------------FEAEFRRPKS--- 217
            ....|:  |.....|        .|.|:.|:|..|.|.||            |:...|..|.   
 Frog   189 SVSARNKILDMWNEFTVEDYIRNSEYFSKEIAKNKTSKKSKEWSHKITIPEPFQMTIRESKKKEM 253

  Fly   218 --TSSNGTQTQTN---KQSQTQNRCQK--TANP---------GQHTAERAKCRREMLRR------ 260
              .|.:..:.:.|   |:.:.:..|||  .|||         .|...||.:.||..::.      
 Frog   254 NIKSKSEIELENNLLKKKLEEEAECQKKFRANPVPSSVYLPLYQEIVERNEERRSFVKEKSKDIL 318

  Fly   261 CFSVNDLQGIALEAHSKPSKL----------------AQPARSNYFPLS-----KQEEIPK-IQI 303
            ..:....|.|..|...|..:|                |:|...:.:..|     |:||:.: |:|
 Frog   319 LATQKPFQFIEREERKKTLRLDFMNLSTSVPSANHFKAKPVPKSIYGTSTAERLKEEELYRGIRI 383

  Fly   304 QSPTTSSKRSSS-----ASSAARGRGRRGRVRKPKPGSSVKDEKPLPPLS--------IYE---- 351
            ........::||     .:..|....::|:..|||     :.:|..|.:|        ::|    
 Frog   384 HMRAQELLQNSSYPTITLAPGAHSGTKKGKCYKPK-----EKQKHKPKISATIPHSQTMHENQQK 443

  Fly   352 -LPE----------EPVQRRTPSVSPLHPVSRPNLAATLRAEVSRKKVKELKNNCTYHDPRPQFD 405
             |||          ||.|.||.::    |..:..:...::|:  .:.:||.:  ..|..||.|. 
 Frog   444 RLPESTSTKHVTVCEPFQLRTSNI----PSHKEKIIMDIQAD--EENLKETR--WPYKSPRAQA- 499

  Fly   406 WEVRKTPAWKSLSLNESHKALLSIRLAT---RKAEQAFQERQ------YELHMEMMRQRVKSAPL 461
             .:..:..    :||...:||.:|..:|   ::.|.|.::|:      |...:|.|.|||.:.||
 Frog   500 -RIHSSAG----TLNPQGEALCNIPRSTELSKRREHAIRKREKQRTKDYMKELEAMEQRVLNKPL 559

  Fly   462 LLEGPTFWGPEVGKLTHTCRTEELRHSCEGSRQRRKKKSEFPVPDADTKLQQLRKVYGSEKSCSR 526
            |:|                |..:........:|               .|..||.:..||:..|:
 Frog   560 LIE----------------RVAQRNALMSAEKQ---------------YLNVLRDLGLSEEFVSK 593

  Fly   527 QSQR-------SKRSERRPQGLTTE 544
            ..|.       |.|.|..|:..:||
 Frog   594 NGQSASVDEHVSVREENNPRAESTE 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1113NP_001262277.1 None
fam161aNP_001119995.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..59 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..190 4/24 (17%)
UPF0564 234..576 CDD:287553 77/376 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..428 7/31 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 594..659 7/25 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003802
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.