DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CtsF and CP1

DIOPT Version :10

Sequence 1:NP_730901.1 Gene:CtsF / 40628 FlyBaseID:FBgn0260462 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_195406.2 Gene:CP1 / 829841 AraportID:AT4G36880 Length:376 Species:Arabidopsis thaliana


Alignment Length:305 Identity:122/305 - (40%)
Similarity:177/305 - (58%) Gaps:28/305 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   324 ERQMRLRIFRQNLKTIEELNANEMGSA-KYGITEFADMTSSEYKERTGLWQRDE-----AKATGG 382
            ::..|..||:.||:.|:..|.|...:. |.|:|:|.|:|:.||: :..|..|.|     |||...
plant    69 DQDKRFNIFKDNLRFIDLHNENNKNATYKLGLTKFTDLTNDEYR-KLYLGARTEPARRIAKAKNV 132

  Fly   383 SAAVVPAYHG-ELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQEL 446
            :.....|.:| |:|:..|||||.||..:|:||:||||||||.|..:||:..:.||||...|||||
plant   133 NQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQEL 197

  Fly   447 LDCDTT-DSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCH-FNRTLSHVQVAGFVDLPKG 509
            :|||.: :..|||||||.|::.|...|||..|.:|||:....:|: |.:....|.:.|:.|:|..
plant   198 VDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTK 262

  Fly   510 NETAMQEWLLANGPISIGINANA--MQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHK 572
            :|||::: .::..|:|:.|.|..  .|.|:.|:   :...|. .||||.|:.||||..:      
plant   263 DETALKK-AISYQPVSVAIEAGGRIFQHYQSGI---FTGSCG-TNLDHAVVAVGYGSEN------ 316

  Fly   573 TLPYWIVKNSWGPRWGEQGYYRVYRG-----DNTCGVSEMATSAV 612
            .:.||||:|||||||||:||.|:.|.     ...||::..|:..|
plant   317 GVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASYPV 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsFNP_730901.1 Inhibitor_I29 308..365 CDD:462410 14/41 (34%)
Peptidase_C1A 395..611 CDD:239068 96/224 (43%)
CP1NP_195406.2 Inhibitor_I29 49..110 CDD:214853 14/40 (35%)
Peptidase_C1 145..361 CDD:425470 96/226 (42%)

Return to query results.
Submit another query.