DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12163 and LOC594890

DIOPT Version :9

Sequence 1:NP_730901.1 Gene:CG12163 / 40628 FlyBaseID:FBgn0260462 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001076821.2 Gene:LOC594890 / 594890 -ID:- Length:333 Species:Xenopus tropicalis


Alignment Length:378 Identity:114/378 - (30%)
Similarity:174/378 - (46%) Gaps:64/378 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 RCIVDIWTKVWVRKDEHEITFKCRNQPVVQARHTRSVEWAEKKTHKKHSHRFDKVDHLFYKFQVR 314
            :|::.::..:        :|..|...|.:. .|.|.  |.:  ||||           .||    
 Frog     6 QCLIGLFALL--------LTAHCEPDPSLD-NHWRL--WVQ--THKK-----------IYK---- 42

  Fly   315 FGRRYVSTAERQMRLRIFRQNLKTIEELNAN-EMGSAKY--GITEFADMTSSEYKERTGLWQRDE 376
                  :..|...|..|:...||.|...|.. .||...|  |:....||.:.|..::    |.:.
 Frog    43 ------NEGEELARRLIWEDTLKFIMLHNLEYSMGLHTYEVGMNHLGDMVAEEMTDK----QMNF 97

  Fly   377 AKATGGSAAVVPAYHGEL-----PKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIE-GLYAVKT 435
            ......:...||.   |:     |:..|||.|:.||.||:||||.:.||||..|.:| .....:|
 Frog    98 IPQVIANITDVPV---EISKSSPPESIDWRNKNCVTSVKDQGSCIASWAFSSIGALECQNMKRRT 159

  Fly   436 GELKEFSEQELLDCDTT--DSACNGGLMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFNRTLSHV 498
            |:|:..|.|.||||..|  ::.|.||.:.::::.|.| .|:|.|:.|||:.|..:|.:.......
 Frog   160 GKLESLSVQNLLDCSQTYGNNGCKGGWVVSSFRYIID-NGIELESNYPYQGKDGKCSYTPVKKAS 223

  Fly   499 QVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQF--YRGGVSHPWKALCSKKNLDHGVLVVG 561
            ....:..||.|:|..:::.:...||:|:.|:|:...|  |:.||.  :...||....||.|||||
 Frog   224 VCTSYRQLPYGDEATLKQVVGLMGPVSVAIDASRKTFRMYKNGVY--YDPNCSSSTPDHSVLVVG 286

  Fly   562 YGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRG-DNTCGVSEMATSAVL 613
            ||..|      .:.||:||||||..:|::||.::.|. .|.||::......|:
 Frog   287 YGAED------GVEYWLVKNSWGTSFGDEGYIKMARNHHNNCGIANFGCFPVV 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12163NP_730901.1 CY 194..272 CDD:298856 2/21 (10%)
Inhibitor_I29 308..365 CDD:285458 15/59 (25%)
Peptidase_C1A 395..611 CDD:239068 82/221 (37%)
LOC594890NP_001076821.2 Inhibitor_I29 30..89 CDD:214853 21/83 (25%)
Peptidase_C1A 118..331 CDD:239068 82/221 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.