DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsF and ctsbb

DIOPT Version :10

Sequence 1:NP_730901.1 Gene:CtsF / 40628 FlyBaseID:FBgn0260462 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001418075.1 Gene:ctsbb / 569298 ZFINID:ZDB-GENE-070323-1 Length:326 Species:Danio rerio


Alignment Length:258 Identity:70/258 - (27%)
Similarity:107/258 - (41%) Gaps:55/258 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 ELPKEFD----WRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAV--KTGELKEFSEQELLD-CD 450
            :||..||    |.....:.|:::||||||||||....:|.....:  |..:..|.|.::||. ||
Zfish    74 KLPDSFDLRDQWPNCKTLNQIRDQGSCGSCWAFGAVESISDRICIHSKGKQSPEISAEDLLSCCD 138

  Fly   451 TTDSACNGGLMDNAY----KAIKDIGGLEYEAEY---PYKAKKNQCHFNRTLSHVQVAGFVDLPK 508
            .....|:||....|:    ::....||| |.::.   ||.....:.|.|.|  ....:|..|.||
Zfish   139 QCGFGCSGGFPAEAWDYWRRSGLVTGGL-YNSDVGCRPYSIAPCEHHVNGT--RPPCSGEQDTPK 200

  Fly   509 ---------------------------GNETAMQEWLLANGPISIGINA-NAMQFYRGGVSHPWK 545
                                       .::..:...|..|||:...... .....|:.||   ::
Zfish   201 CTGVCIPKYSVPYKQDKHFGSKVYNVPSDQQQIMTELYTNGPVEAAFTVYEDFPLYKSGV---YQ 262

  Fly   546 ALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGV-SEM 607
            .|.......|.|.::|:|..:      ..|:|:|.|||...||:.||:::.||.:.||: |||
Zfish   263 HLTGSALGGHAVKILGWGEEN------GTPFWLVANSWNSDWGDNGYFKILRGHDECGIESEM 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsFNP_730901.1 Inhibitor_I29 308..365 CDD:462410
Peptidase_C1A 395..611 CDD:239068 69/256 (27%)
ctsbbNP_001418075.1 Propeptide_C1 23..60 CDD:462365
Peptidase_C1A_CathepsinB 76..322 CDD:239111 69/256 (27%)
Blue background indicates that the domain is not in the aligned region.

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