DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12163 and tspan1

DIOPT Version :9

Sequence 1:NP_730901.1 Gene:CG12163 / 40628 FlyBaseID:FBgn0260462 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001016107.1 Gene:tspan1 / 548861 XenbaseID:XB-GENE-868363 Length:245 Species:Xenopus tropicalis


Alignment Length:51 Identity:16/51 - (31%)
Similarity:21/51 - (41%) Gaps:6/51 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   320 VSTAERQMRLRI---FRQNLKTIEELNANEMGSAKYGI--TEFADMTSSEY 365
            |.|.:..|...:   |.|.:..|.: ||..:|....||  .|.|.|..|.|
 Frog   186 VCTQQGAMNSHVSGCFSQLIYLIRQ-NAAIVGGVAAGICALELAAMVVSMY 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12163NP_730901.1 CY 194..272 CDD:298856
Inhibitor_I29 308..365 CDD:285458 15/49 (31%)
Peptidase_C1A 395..611 CDD:239068
tspan1NP_001016107.1 Tetraspannin 7..236 CDD:366035 16/51 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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