DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12163 and Ctsw

DIOPT Version :9

Sequence 1:NP_730901.1 Gene:CG12163 / 40628 FlyBaseID:FBgn0260462 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001019413.1 Gene:Ctsw / 293676 RGDID:1309354 Length:371 Species:Rattus norvegicus


Alignment Length:324 Identity:113/324 - (34%)
Similarity:182/324 - (56%) Gaps:17/324 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   303 KVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKE 367
            ::..:|..||::|.|.|.:.||...||.||..||...:.|...::|:|::|.|.|:|:|..|:.:
  Rat    35 ELKEVFKLFQIQFNRSYSNPAEYTRRLGIFAHNLAQAQRLQEEDLGTAEFGQTPFSDLTEEEFGQ 99

  Fly   368 RTGLWQRDEAKATGGSAAVVPAYHGE-LPKEFDWRQ-KDAVTQVKNQGSCGSCWAFSVTGNIEGL 430
            ..| .||...:....:..|.....|| :|...|||: |:.::.:||||:|..|||.:...||:.|
  Rat   100 LYG-HQRAPERILNMAKKVKSERWGESVPPTCDWRKVKNIISSIKNQGNCRCCWAIAAADNIQTL 163

  Fly   431 YAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAEYPYKA--KKNQCHFNR 493
            :.:||.:..:.|.|||||||...:.||||.:.:||..:.:..||..|.:||::.  |.::|..::
  Rat   164 WRIKTQQFVDVSVQELLDCDRCGNGCNGGFVWDAYITVLNNSGLASEEDYPFQGHQKPHRCLADK 228

  Fly   494 TLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVL 558
            ......:..|..| ..||..:..:|..:|||::.||...:|:|:.||.....:.|....::|.||
  Rat   229 YRKVAWIQDFTML-SSNEQVIAGYLAIHGPITVTINMKLLQYYQKGVIKATPSTCDPHLVNHSVL 292

  Fly   559 VVGYG-----------VSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSA 611
            :||:|           :|......::.||||:|||||..|||:||:|:|||:||||:::...:|
  Rat   293 LVGFGKEKGGMQTGTLLSHSRKPRRSTPYWILKNSWGAEWGEKGYFRLYRGNNTCGIAKYPITA 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12163NP_730901.1 CY 194..272 CDD:298856
Inhibitor_I29 308..365 CDD:285458 22/56 (39%)
Peptidase_C1A 395..611 CDD:239068 83/229 (36%)
CtswNP_001019413.1 Inhibitor_I29 40..96 CDD:214853 22/55 (40%)
Peptidase_C1 126..356 CDD:278538 83/230 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 51 1.000 Domainoid score I11292
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1264766at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12411
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

Return to query results.
Submit another query.