DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsF and Ctsc

DIOPT Version :10

Sequence 1:NP_730901.1 Gene:CtsF / 40628 FlyBaseID:FBgn0260462 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_034112.3 Gene:Ctsc / 13032 MGIID:109553 Length:462 Species:Mus musculus


Alignment Length:367 Identity:99/367 - (26%)
Similarity:163/367 - (44%) Gaps:75/367 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 FYKFQVR-------------------FGRRYVSTAERQMRLRIFRQNLKTI----------EELN 343
            |:|::||                   .||.:.....:::...|.:.|:...          |.|.
Mouse   104 FFKYEVRGHTAISYCHETMTGWVHDVLGRNWACFVGKKVESHIEKVNMNAAHLGGLQERYSERLY 168

  Fly   344 ANEMGSAKYGITEFADMTSSEYKERTGLWQRDEAKATGGSAAV---VPAYHGE--------LPKE 397
            .:.....|...|.....|::.|||...:..||..:.:|.|..:   .||...:        ||:.
Mouse   169 THNHNFVKAINTVQKSWTATAYKEYEKMSLRDLIRRSGHSQRIPRPKPAPMTDEIQQQILNLPES 233

  Fly   398 FDWRQKDA---VTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKE--FSEQELLDCDTTDSACN 457
            :|||....   |:.|:||.|||||::|:..|.:|....:.|...:.  .|.||::.|......|:
Mouse   234 WDWRNVQGVNYVSPVRNQESCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSPYAQGCD 298

  Fly   458 GG---LMDNAYKAIKDIGGLEYEAEYPYKAKKNQCHFNR------TLSHVQVAGFVDLPKG-NET 512
            ||   |:  |.|..:|.|.:| |:.:||.||.:.|....      :..:..|.||..   | ||.
Mouse   299 GGFPYLI--AGKYAQDFGVVE-ESCFPYTAKDSPCKPRENCLRYYSSDYYYVGGFYG---GCNEA 357

  Fly   513 AMQEWLLANGPISIG--INANAMQFYRG-----GVSHPWKALCSKKNLDHGVLVVGYGVSDYPNF 570
            .|:..|:.:||:::.  ::.:.:.::.|     |:|.|:...   :..:|.||:||||...... 
Mouse   358 LMKLELVKHGPMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPF---ELTNHAVLLVGYGRDPVTG- 418

  Fly   571 HKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAV 612
               :.|||:|||||..|||.||:|:.||.:.|.:..:|.:|:
Mouse   419 ---IEYWIIKNSWGSNWGESGYFRIRRGTDECAIESIAVAAI 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsFNP_730901.1 Inhibitor_I29 308..365 CDD:462410 13/85 (15%)
Peptidase_C1A 395..611 CDD:239068 75/237 (32%)
CtscNP_034112.3 CathepsinC_exc 25..138 CDD:462598 6/33 (18%)
Pox_I6 168..>204 CDD:333259 8/35 (23%)
Peptidase_C1A_CathepsinC 230..459 CDD:239112 77/241 (32%)

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