DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsF and Swim

DIOPT Version :10

Sequence 1:NP_730901.1 Gene:CtsF / 40628 FlyBaseID:FBgn0260462 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_061500477.1 Gene:Swim / 1269545 VectorBaseID:AGAMI1_006202 Length:471 Species:Anopheles gambiae


Alignment Length:296 Identity:84/296 - (28%)
Similarity:124/296 - (41%) Gaps:57/296 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 TEFADMTSSEYKE----RTGLWQ-RDEAKA-----TGGSAAVVPAYHGELPKEFD----WRQKDA 405
            |.:::....:|.|    |.|.:| |...||     ..|         |.||..||    |  ...
Mosquito   155 TNYSEWWGHKYDEGKVLRLGTFQPRFRVKAMKRLSNKG---------GHLPSRFDASEHW--TGL 208

  Fly   406 VTQVKNQGSCGSCWAFSVTGNIEGLYAV--KTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAI 468
            |.:.::||.|||.||||........:|:  |..|:.:.:.|::|.|......|:||.:|.|::.:
Mosquito   209 VAEARDQGWCGSSWAFSTATMASDRFAILSKGREMVQLAPQQMLACVRRQQGCSGGHLDTAWQYL 273

  Fly   469 KDIGGLEYEAEYPYKAKKNQCHF-----------------NRTLSHVQVAGFVDLPKGNETAMQE 516
            :..|.:..|. |||.|.:|.|..                 ||||.:.....|   ...|||.:..
Mosquito   274 RRTGVVNEEC-YPYIAAQNVCKISNDDTLITANCELPVKVNRTLMYKMGPAF---SLNNETDIMA 334

  Fly   517 WLLANGPISIGINANAMQF-YRGGV-SHPWKAL-CSKKNLDHGVLVVGYGVSDYPNFHKTLPYWI 578
            .:...|.:...:......| ||.|: .|...|. ..:::..|.|.::|:|.....  :..:.|||
Mosquito   335 EIKDRGTVQAIMRVYRDFFSYRSGIYRHSAAATPAEERSAYHSVRLIGWGEERVG--YDVVKYWI 397

  Fly   579 VKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVLA 614
            ..||||..|||.|.:|:.||.|.|.:.    |.|||
Mosquito   398 AINSWGQWWGENGRFRILRGSNECDIE----SYVLA 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsFNP_730901.1 Inhibitor_I29 308..365 CDD:462410 1/9 (11%)
Peptidase_C1A 395..611 CDD:239068 68/241 (28%)
SwimXP_061500477.1 None

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