DRSC/TRiP Functional Genomics Resources

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Protein Alignment rtp and RSPH1

DIOPT Version :9

Sequence 1:NP_649520.1 Gene:rtp / 40627 FlyBaseID:FBgn0087005 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_543136.1 Gene:RSPH1 / 89765 HGNCID:12371 Length:309 Species:Homo sapiens


Alignment Length:98 Identity:34/98 - (34%)
Similarity:47/98 - (47%) Gaps:12/98 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DASRYIGEWNQRGQKHGIGHLQFADGTRYDGQFQEGLSQGVGCLWFADGAKYEGEFHQGWFHGNG 124
            |...|.|..|:.|::||.|..:..:|..|:|.::.|...|.|...|.:||:|.||:.:...||.|
Human    16 DIGEYEGGRNEAGERHGRGRARLPNGDTYEGSYEFGKRHGQGIYKFKNGARYIGEYVRNKKHGQG 80

  Fly   125 IFWRADGMKYEGEFRGGKIWGLGLLTFQDFTHG 157
            .|...||.:||||      |.      .|..||
Human    81 TFIYPDGSRYEGE------WA------NDLRHG 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rtpNP_649520.1 COG4642 54..>151 CDD:332236 31/90 (34%)
RSPH1NP_543136.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 8/25 (32%)
COG4642 20..>148 CDD:332236 33/94 (35%)
MORN 1 20..43 8/22 (36%)
MORN 2 44..66 7/21 (33%)
MORN 3 67..89 9/21 (43%)
MORN 4 90..112 8/24 (33%)
MORN 5 113..135
MORN 6 159..181
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..309
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4642
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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