DRSC/TRiP Functional Genomics Resources

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Protein Alignment rtp and rsph10b

DIOPT Version :10

Sequence 1:NP_649520.1 Gene:rtp / 40627 FlyBaseID:FBgn0087005 Length:198 Species:Drosophila melanogaster
Sequence 2:NP_001070227.1 Gene:rsph10b / 767792 ZFINID:ZDB-GENE-060929-300 Length:731 Species:Danio rerio


Alignment Length:191 Identity:46/191 - (24%)
Similarity:75/191 - (39%) Gaps:37/191 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DMSSVGVTTARIENQHQQHPHQQGQH----------------------GHHQQGQGQSQYSAGAV 51
            |:||..|.:|...:.........|:|                      |....|:|.:.:..|.|
Zfish    44 DLSSSAVCSASTVSLPPNENQPIGEHDRCRTVPVLHSIIVERYEGEKCGEMFHGEGVAYFQGGHV 108

  Fly    52 KVGGWRYEDASRYIGEWNQRGQKHGIGHLQFADGTRYDGQFQEGLSQGVGCLWFADGAKYEGEFH 116
            ..|.:.:             |..||.|...::||.:|.|.|:..:..|.|...:.:|:.||||.|
Zfish   109 YKGSFSH-------------GLMHGYGEYIWSDGLKYQGDFKVNVPMGHGTYTWLNGSTYEGEVH 160

  Fly   117 QGWFHGNGIFWRADGMK-YEGEFRGGKIWGLGLLTFQDFTHGFPRNEGFFQDCRFMRRRRC 176
            ||..||.|::.....:. |.|::..||..|.|.:.:......:.:.| :..:||....:||
Zfish   161 QGIRHGVGMYKCVKTLTVYRGQWYLGKRQGQGEMFYNQEATSWYKGE-WVNNCREGWGKRC 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rtpNP_649520.1 COG4642 <53..153 CDD:443680 29/100 (29%)
rsph10bNP_001070227.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 6/24 (25%)
COG4642 84..336 CDD:443680 39/151 (26%)
MORN 1 86..108 4/21 (19%)
MORN 2 109..131 7/34 (21%)
MORN 3 132..154 6/21 (29%)
MORN 4 155..177 10/21 (48%)
MORN 5 179..201 6/21 (29%)
MORN 6 204..226 5/18 (28%)
MORN 7 227..249
MORN 8 251..273
MORN 9 284..306
MORN 10 307..329
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 353..377
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 709..731
Blue background indicates that the domain is not in the aligned region.

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