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Protein Alignment rtp and jph2
DIOPT Version :9
Sequence 1: | NP_649520.1 |
Gene: | rtp / 40627 |
FlyBaseID: | FBgn0087005 |
Length: | 198 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001082833.1 |
Gene: | jph2 / 553333 |
ZFINID: | ZDB-GENE-030131-9848 |
Length: | 781 |
Species: | Danio rerio |
Alignment Length: | 129 |
Identity: | 41/129 - (31%) |
Similarity: | 63/129 - (48%) |
Gaps: | 23/129 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 34 HGH----HQQGQGQ--SQYSAGAVKVGGWRYEDASRYIGEWNQRGQKHGIGHLQFADGTRYDGQF 92
||| ..:|||: ..::.|...||.:.:...:.|.|.|:| |::||:| ::......|.|::
Zfish 24 HGHGICTGPKGQGEFSGSWNYGFEVVGVYTWPSGNTYEGYWSQ-GKRHGLG-VETKGHWIYKGEW 86
Fly 93 QEG--------LSQGVGCLWFADGAKYEGEFHQGWFHGNGIFWRADGMKYEGEFRGGKIWGLGL 148
..| :||| .||||||.::.|...|.|....|||..::|:|.||...|.|:
Zfish 87 THGFKGRYGTRISQG-------SGAKYEGTWNNGLQDGYGTETYADGGTFQGQFTGGMRHGYGV 143
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG4642 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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