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Protein Alignment rtp and Rsph1
DIOPT Version :9
Sequence 1: | NP_649520.1 |
Gene: | rtp / 40627 |
FlyBaseID: | FBgn0087005 |
Length: | 198 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_609609.1 |
Gene: | Rsph1 / 34712 |
FlyBaseID: | FBgn0032478 |
Length: | 344 |
Species: | Drosophila melanogaster |
Alignment Length: | 124 |
Identity: | 39/124 - (31%) |
Similarity: | 62/124 - (50%) |
Gaps: | 11/124 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 GHHQQGQGQSQYSAGAVKVGGWR-YEDASRYIGEWNQRGQKHGIGHLQFADGTRYDGQFQEGLSQ 98
|.:..||.|.: ||. ..:..:|.|.: ::|::||||...|.||:||.||::.|...
Fly 30 GRNAAGQRQGR---------GWAILPNGDQYDGNY-RKGRRHGIGVYVFKDGSRYYGQYRCGKRC 84
Fly 99 GVGCLWFADGAKYEGEFHQGWFHGNGIFWRADGMKYEGEFRGGKIWGLGLLTFQDFTHG 157
|.|...:.||:.|||.:.:...||.|.:...:|..|.|::..|:..|:|:..|.....|
Fly 85 GRGIFIYPDGSVYEGNWRKNLKHGKGRYKYVNGDNYSGDWFKGQRHGVGIYHFNSGKDG 143
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG4642 |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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