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Protein Alignment rtp and Jph3
DIOPT Version :9
Sequence 1: | NP_649520.1 |
Gene: | rtp / 40627 |
FlyBaseID: | FBgn0087005 |
Length: | 198 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001100907.1 |
Gene: | Jph3 / 307916 |
RGDID: | 1308416 |
Length: | 749 |
Species: | Rattus norvegicus |
Alignment Length: | 124 |
Identity: | 41/124 - (33%) |
Similarity: | 60/124 - (48%) |
Gaps: | 13/124 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 34 HGH----HQQGQGQ--SQYSAGAVKVGGWRYEDASRYIGEWNQRGQKHGIGHLQFADGTRYDGQF 92
||| ..:|||: ..:|.|...:|.:.:...:.|.|.|.| |::|||| |:......|.|::
Rat 25 HGHGVCTGPKGQGEYTGSWSHGFEVLGVYTWPSGNTYQGTWAQ-GKRHGIG-LESKGKWVYKGEW 87
Fly 93 QEGLSQGVG---CLWFADGAKYEGEFHQGWFHGNGIFWRADGMKYEGEFRGGKIWGLGL 148
..|.....| |. .:||||||.:..|...|.|....:||..|:|::.||...|.|:
Rat 88 THGFKGRYGVRECT--GNGAKYEGTWSNGLQDGYGTETYSDGGTYQGQWVGGMRQGYGV 144
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG4642 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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