DRSC/TRiP Functional Genomics Resources

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Protein Alignment rtp and morn4

DIOPT Version :10

Sequence 1:NP_649520.1 Gene:rtp / 40627 FlyBaseID:FBgn0087005 Length:198 Species:Drosophila melanogaster
Sequence 2:XP_002939708.2 Gene:morn4 / 100379992 XenbaseID:XB-GENE-940246 Length:149 Species:Xenopus tropicalis


Alignment Length:139 Identity:70/139 - (50%)
Similarity:94/139 - (67%) Gaps:1/139 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GGWRYEDASRYIGEWNQRGQKHGIGHLQFADGTRYDGQFQEGLSQGVGCLWFADGAKYEGEFHQG 118
            |.::|.....|.|||.: |::||||.|.||||:.|.|||:.||..|.|.|.|.||::|||||.||
 Frog     6 GSFKYSSGEEYHGEWKE-GRRHGIGQLLFADGSIYVGQFENGLFSGCGVLTFPDGSRYEGEFVQG 69

  Fly   119 WFHGNGIFWRADGMKYEGEFRGGKIWGLGLLTFQDFTHGFPRNEGFFQDCRFMRRRRCPEVVQRA 183
            .|.|.|:|.|.|.||:||||:||::.|.||||:.|.:||.|||||.|::.:.::|.:|...:|||
 Frog    70 KFQGTGVFTRYDNMKFEGEFKGGRVEGYGLLTYSDGSHGIPRNEGLFENNKLVKREKCQTAIQRA 134

  Fly   184 QKCALMARS 192
            ...:..|.|
 Frog   135 LSASKAACS 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rtpNP_649520.1 COG4642 <53..153 CDD:443680 54/98 (55%)
morn4XP_002939708.2 COG4642 <5..118 CDD:443680 63/112 (56%)

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