DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mms19 and MET18

DIOPT Version :10

Sequence 1:NP_649519.1 Gene:Mms19 / 40626 FlyBaseID:FBgn0037301 Length:959 Species:Drosophila melanogaster
Sequence 2:NP_012138.1 Gene:MET18 / 854678 SGDID:S000001390 Length:1032 Species:Saccharomyces cerevisiae


Alignment Length:1098 Identity:240/1098 - (21%)
Similarity:431/1098 - (39%) Gaps:250/1098 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DQKLVNSATQIAKDLTAKAYDISALAEAL-GFALSSPDMEERVAGTNLLSAVLIALPQDLLQERQ 79
            |.|...:|:.:...:..::..:..:..|| .:.||..::|.:.|.| .|:.:|...|:|.|.:.:
Yeast    21 DSKANETASTVTDSIVHRSIKLLEVVVALKDYFLSENEVERKKALT-CLTTILAKTPKDHLSKNE 84

  Fly    80 LEFLSTFYMDRLRDHHNVMPAIIDGIDALVHMKALPRAQIPQILQSFFEHTTCQSQTRSDRTKLF 144
            ...:..||..:| |...:...:::|..||..||.:...:|.|:|:...::........|.|...|
Yeast    85 CSVIFQFYQSKL-DDQALAKEVLEGFAALAPMKYVSINEIAQLLRLLLDNYQQGQHLASTRLWPF 148

  Fly   145 HIFQYLTENF------QDELQAMAGDFVYGLINSIDGERDPRNLDIIFSFMPEFLSTYP-LLHLA 202
            .|.:.:.:.|      .::::.:...|:...::..:||:|||||.:.|:......|:.. :.:..
Yeast   149 KILRKIFDRFFVNGSSTEQVKRINDLFIETFLHVANGEKDPRNLLLSFALNKSITSSLQNVENFK 213

  Fly   203 EEMFEIFACYFPIDFNPSKQDPAAITRDELSKKLTNCLVANNEFAEGTVVLAIEKLESELLVAKL 267
            |::|::..|||||.|.|.|.||..|:..:|...|.:.:.|...|||......::||.:...|.|.
Yeast   214 EDLFDVLFCYFPITFKPPKHDPYKISNQDLKTALRSAITATPLFAEDAYSNLLDKLTASSPVVKN 278

  Fly   268 DSIELLHQAAVKFPPSVLEPHFDQIWQALKTETFPGNDNEEILKASLKALSALLERAAHIPDISH 332
            |::..|.:...||..|.:..::..:|.|||.|....::..|         :.||.      ..:.
Yeast   279 DTLLTLLECVRKFGGSSILENWTLLWNALKFEIMQNSEGNE---------NTLLN------PYNK 328

  Fly   333 SYQSSILGVILPHLSDVNQRLFHPATGIALVCVSGDAPYAADKILNSFLLKLQAADASSEQRIKI 397
            ..||          .||.|...:.|      |:         ||:|...|:|...|       |:
Yeast   329 DQQS----------DDVGQYTNYDA------CL---------KIINLMALQLYNFD-------KV 361

  Fly   398 YYIVSQVYKLSALRGSLQKLDTTIRESVQ-------------DDVIAS---LRLIEQEEFDAKKE 446
            .:.....:.|..|:.:. |.:..::::.|             :.||:|   |.||...       
Yeast   362 SFEKFFTHVLDELKPNF-KYEKDLKQTCQILSAIGSGNVEIFNKVISSTFPLFLINTS------- 418

  Fly   447 DLELQKAALSVLNES-------------------APLLNEK------------QRALIYKALVQL 480
              |:.|..|.::|.|                   .|:.|.|            ..||...:..::
Yeast   419 --EVAKLKLLIMNFSFFVDSYIDLFGRTSKESLGTPVPNNKMAEYKDEIIMILSMALTRSSKAEV 481

  Fly   481 VSHPSIDIDFTTLTVSLGALQPVEV---------------QSNFIDVCVRNF----EIFSTFVKR 526
            .......|.||.:....|.|.|.||               ..|....|:...    ||:...|..
Yeast   482 TIRTLSVIQFTKMIKMKGFLTPEEVSLIIQYFTEEILTDNNKNIYYACLEGLKTISEIYEDLVFE 546

  Fly   527 KIYTNLLPLMPQIAFTQRI---------LDLVMTQTFNDTTA------EPVRLLALEALNKLLLL 576
            .....||.|:|. .|.::|         ::.::....:.||:      |.:..||.: ||::..:
Yeast   547 ISLKKLLDLLPD-CFEEKIRVNDEENIHIETILKIILDFTTSRHILVKESITFLATK-LNRVAKI 609

  Fly   577 ADQR---FIV---------DVQQESNLLHKLIELGQKTEGLSMQSLEQIAGALSRITQQLPLSEQ 629
            :..|   |::         :..|..|:|:       :.:.|::::  .|...|..|     ::::
Yeast   610 SKSREYCFLLISTIYSLFNNNNQNENVLN-------EEDALALKN--AIEPKLFEI-----ITQE 660

  Fly   630 SAIVSE-----------YLPGLNLSQSA---------DLYITKG-----------------LLGY 657
            |||||:           :...|.:.|:|         :|:|::|                 :|..
Yeast   661 SAIVSDNYNLTLLSNVLFFTNLKIPQAAHQEELDRYNELFISEGKIRILDTPNVLAISYAKILSA 725

  Fly   658 LHKDITLDDHFERLLTDLTQLSLN----SDNEQLRVIAHHLLCSMVNKMESNPANLRKVKKITEQ 718
            |:|:......|..|...:..|..:    ::.|:|..:  .||..:.||.            ::|:
Yeast   726 LNKNCQFPQKFTVLFGTVQLLKKHAPRMTETEKLGYL--ELLLVLSNKF------------VSEK 776

  Fly   719 LKVAI---KKGDVRAVEILAWVGKGLVVAGFDEAADVVGDLSDLLKHPSLSTAAALGFDIIAAEY 780
            ..:.:   |...|..:|::.|:.|||::....|::::.....|||.:..:.:..:..|::...:.
Yeast   777 DVIGLFDWKDLSVINLEVMVWLTKGLIMQNSLESSEIAKKFIDLLSNEEIGSLVSKLFEVFVMDI 841

  Fly   781 PELDL-------PVVKFLYKQKLFHTIMGKMGSKLAN------YCVHHLKAFVYVLKATPQAVIK 832
            ..|..       ..||.|||||.|..|...:.|...|      .| ::|.|...|||.||...:.
Yeast   842 SSLKKFKGISWNNNVKILYKQKFFGDIFQTLVSNYKNTVDMTIKC-NYLTALSLVLKHTPSQSVG 905

  Fly   833 LNIEQLGPLLFKSLEEHNEAQSLCIALGICEKFVAQQDTYFQGHLAHLIPSCLELSKYKAQHTMQ 897
            ..|..|.|||.::| :..:.:....||...:....:..|....|::.::|..|.||.....:::.
Yeast   906 PFINDLFPLLLQAL-DMPDPEVRVSALETLKDTTDKHHTLITEHVSTIVPLLLSLSLPHKYNSVS 969

  Fly   898 VRIAALQLLYDVTK-YPTFVLLPHKVDVTLALAAALDDPKRLVRNTAVKARNAWYLVG 954
            ||:.|||||..:|. .|....|.::.||..||...|.|.||::|...|..|..:|.:|
Yeast   970 VRLIALQLLEMITTVVPLNYCLSYQDDVLSALIPVLSDKKRIIRKQCVDTRQVYYELG 1027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mms19NP_649519.1 MMS19_N 44..302 CDD:433995 71/265 (27%)
MMS19_C <610..910 CDD:463594 80/356 (22%)
MET18NP_012138.1 MMS19_N 49..313 CDD:433995 71/265 (27%)
MMS19_C 577..982 CDD:463594 93/435 (21%)

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