DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps37B and vps37c

DIOPT Version :10

Sequence 1:NP_649518.1 Gene:Vps37B / 40624 FlyBaseID:FBgn0037299 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001071253.1 Gene:vps37c / 777738 ZFINID:ZDB-GENE-061110-126 Length:323 Species:Danio rerio


Alignment Length:260 Identity:66/260 - (25%)
Similarity:115/260 - (44%) Gaps:66/260 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MCHEELKELLNDDDKLDE---KVDEVLQVLRTQKTSVFEDNRSRAERNIEREPQIIELRGQLAEL 77
            :...||::||::.::::.   :.||: |.::.::......|||.||:|::.:|:|...|.:|.| 
Zfish     7 LSQSELQDLLDNLERVESMALESDEI-QNIQLEREMALAANRSLAEQNLDMKPRIENDRARLVE- 69

  Fly    78 SEDGRTRCSSVQEKLSQ---LKEK-SGGVGLETALALLQTAASESEEQTEEMVKKFNDSDIGVED 138
               ..|...:|:||..|   |::. .|.|..|..|:.||...:.:|.::|.:..:|.:..|.::.
Zfish    70 ---KYTELEAVREKYKQHCVLRDSIMGQVSPEGLLSRLQAEGASTEAESEALADEFLEGSISLDS 131

  Fly   139 FLDAFLPIRRTMHLRRLKAEKMQELMRK--------------------------QRQGPGPNTSL 177
            ||:.||.:|...|.||::.||:||::.:                          |:|.|..::.:
Zfish   132 FLERFLSLRSLAHTRRVRIEKLQEILSQKSKGIGDATIASQPCASQDAGSSSPWQQQQPQQSSKI 196

  Fly   178 PAYGNVPSSGF----YPASGGSA-------------PYPIMGPLMPMP-----------PPSRPY 214
            .|..|..||..    ||.:..||             |||..|...|..           ||:.||
Zfish   197 NAPSNASSSALPYSPYPVAPPSASTAGSTNPSTAFQPYPSQGAPFPQATGFPAPRPAFGPPACPY 261

  Fly   215  214
            Zfish   262  261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps37BNP_649518.1 Mod_r 19..157 CDD:462117 42/144 (29%)
vps37cNP_001071253.1 Mod_r 5..150 CDD:462117 42/147 (29%)
PHA02682 <198..>302 CDD:177464 17/64 (27%)

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