DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps37B and Vps37a

DIOPT Version :9

Sequence 1:NP_001246926.1 Gene:Vps37B / 40624 FlyBaseID:FBgn0037299 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_291038.2 Gene:Vps37a / 52348 MGIID:1261835 Length:397 Species:Mus musculus


Alignment Length:155 Identity:32/155 - (20%)
Similarity:75/155 - (48%) Gaps:20/155 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ELKELLNDDDKLDEKVDEVLQVLRTQKTSVFEDN-RSRAERNIEREPQIIELRGQLAELSEDGRT 83
            :||:::.|.:.|.:.::|:     .:|..:.|.: ..:.:..:::...:::::            
Mouse   261 QLKQIITDKEDLVKNIEEL-----ARKNLLLEHSLEGKRQTVLDKYELLLQMK------------ 308

  Fly    84 RCSSVQEKLSQLKEKSGGVGLETALALLQTAASESEEQTEEMVKKFNDSDIGVEDFLDAFLPIRR 148
              |:.::|:.:..|.|.........|.|:.||.|:||:::.:.:.|.:....::|||::|...|.
Mouse   309 --STFEKKMQRQHELSESCSASALQARLKVAAHEAEEESDNIAEDFLEGKTEIDDFLNSFKEKRT 371

  Fly   149 TMHLRRLKAEKMQELMRKQRQGPGP 173
            ..|.||.|.||:.:::....|...|
Mouse   372 ICHCRRAKEEKLHQVIAMHSQFHAP 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps37BNP_001246926.1 PABP <16..42 CDD:295409 5/21 (24%)
Mod_r 19..153 CDD:284587 25/133 (19%)
Vps37aNP_291038.2 Mod_r 235..376 CDD:284587 25/133 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3270
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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