DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sccpdh1 and AT5G39410

DIOPT Version :9

Sequence 1:NP_649517.1 Gene:Sccpdh1 / 40623 FlyBaseID:FBgn0037298 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_568564.1 Gene:AT5G39410 / 833937 AraportID:AT5G39410 Length:454 Species:Arabidopsis thaliana


Alignment Length:465 Identity:159/465 - (34%)
Similarity:237/465 - (50%) Gaps:71/465 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DVIIFGASGFTGKYTVFEAV--------TVLRGLRWGIAGRNREKLEAVLKEMGAKAKKDLSQVP 63
            |::|.|||||||||.|.||:        :.|:.|  .:||||..:|...| |..|:.....|.|.
plant    12 DMVILGASGFTGKYVVREALKFLQTPSSSPLKSL--ALAGRNPTRLTQSL-EWAARPNPPPSSVA 73

  Fly    64 IFIADVNDQASLLEMAKKCRIVVNTAGPYRFHGENVVKCCIESGTHHVDVSGEPQYMETMQLRYD 128
            |..||.:|..||..:..:.::::|..||:|.||:.||..|.:||..::|:||||::||.|:..|.
plant    74 ILTADTSDPDSLRRLCTQTKLILNCVGPFRIHGDPVVSACADSGCDYLDISGEPEFMERMEANYH 138

  Fly   129 QLAREKGVYVVSACGFDSIPADMGVVFVEKNF--DGVVNSVETF--LETGIKEGGSGGGTAGLNY 189
            ..|.|.|..:|||||||||||::|::|..|.:  ..|.|.:|.:  ||:..|..|        |:
plant   139 DRAEETGSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIEAYLSLESDKKIAG--------NF 195

  Fly   190 GTWESAVYGLAHSDELRGIRKQIYPQRLPRFYPFLKPRPLVF------RSTEVDKV----CLPFP 244
            ||:||||.|:|::::|:.:|:.     .||     :|||.:.      .:.|..|.    .|..|
plant   196 GTYESAVLGVANAEKLKELRRS-----RPR-----RPRPTICGPPAKGPTLENQKTIGLWALKLP 250

  Fly   245 GSDRSVVMRSQRFLYDQD------KKRPVQMQAYVGFSSWLVAG------------GVIFFATI- 290
            .:|..||.|:...|.::.      .:.|.|:|....|.|.:...            |:..:.|: 
plant   251 SADAVVVRRTLTTLTEKPHGLPGINESPEQIQKREAFWSSIKPAHFGVKITSKSLFGIFRYVTLG 315

  Fly   291 --FGLLSKFKLGRTLLLNYPGLFSGGLASRSGPSEESMERTYFKMTFKASGWLKSDRLAESSNQY 353
              .||||||..||.|||.:|.:||.|...:.|||||.:|...|||.|...|: ..:.||   :|.
plant   316 VSLGLLSKFSFGRWLLLKFPSVFSLGWFQKKGPSEEEVESATFKMWFIGRGY-SEESLA---SQG 376

  Fly   354 TESPTKTLMVRVSGMNPGYGATCVAVLSAALTILRESDKMPSTGGVLPPAAAFSKTGLISELEKH 418
            ...|...::.|:||...||..|.:.::...|.:|.:.:.:.. |||..|...|..|.:...||  
plant   377 ETKPDLEIITRISGPEIGYITTPITLVQCGLIVLGQRESLVK-GGVYTPGIVFGSTDIQQRLE-- 438

  Fly   419 DHGIKFEILA 428
            |:||.||:::
plant   439 DNGISFELIS 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sccpdh1NP_649517.1 COG3268 7..426 CDD:225807 158/461 (34%)
Sacchrp_dh_NADP 8..139 CDD:281434 54/138 (39%)
AT5G39410NP_568564.1 COG3268 8..445 CDD:225807 157/460 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 125 1.000 Domainoid score I1791
eggNOG 1 0.900 - - E1_COG3268
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9334
Inparanoid 1 1.050 222 1.000 Inparanoid score I1197
OMA 1 1.010 - - QHG56565
OrthoDB 1 1.010 - - D887497at2759
OrthoFinder 1 1.000 - - FOG0002586
OrthoInspector 1 1.000 - - otm2878
orthoMCL 1 0.900 - - OOG6_101495
Panther 1 1.100 - - LDO PTHR12286
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1697
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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