DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sccpdh1 and sccpdha.1

DIOPT Version :9

Sequence 1:NP_649517.1 Gene:Sccpdh1 / 40623 FlyBaseID:FBgn0037298 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001002359.1 Gene:sccpdha.1 / 436632 ZFINID:ZDB-GENE-040718-51 Length:427 Species:Danio rerio


Alignment Length:436 Identity:183/436 - (41%)
Similarity:260/436 - (59%) Gaps:38/436 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VIIFGASGFTGKYTVFEAVTVLR--------GLRWGIAGRNREKLEAVLKEMGAK-AKKDL-SQV 62
            :||||||||||::.|.|   |.|        .|:|.:|||::.|||.|:::..|. .|.:| ::|
Zfish    14 IIIFGASGFTGQFVVEE---VSRCASEGPKGSLKWAVAGRSKPKLEKVIEQAAANLGKPELKTEV 75

  Fly    63 PIFIADVNDQASLLEMAKKCRIVVNTAGPYRFHGENVVKCCIESGTHHVDVSGEPQYMETMQLRY 127
            .|.:|||:||.||..|.|:..||::..|||||.||.|||.|:|:|.|.:|:|||||::|.|||.|
Zfish    76 DIIVADVSDQESLAAMCKQAVIVLSCVGPYRFFGEPVVKSCVENGAHCLDISGEPQFLEGMQLNY 140

  Fly   128 DQLAREKGVYVVSACGFDSIPADMGVVFVEKNFDGVVNSVETFLETGIKEGGSGGGTAGLNYGTW 192
            ...|.:||||:|.:||||||||||||::....|.|.:.:|::||..     |||...:.||.|||
Zfish   141 HDQAADKGVYIVGSCGFDSIPADMGVIYTRDQFKGTLTAVDSFLTL-----GSGPEGSCLNDGTW 200

  Fly   193 ESAVYGLAHSDELRGIRKQIYPQRLPRFYPFLKPRPLVFRSTEVDKVCLPFPGSDRSVVMRSQRF 257
            :|.:||||...:|:.:||:...:.||...|.:|.|.|:|.|:||.:..:||.|:|.|||.|:||:
Zfish   201 QSVIYGLADKGKLKSLRKKFGHKPLPVVGPKIKRRGLLFYSSEVQQYAIPFIGTDPSVVKRTQRY 265

  Fly   258 LYDQDKKRPVQMQAYVGFSSWLVAGGV------IFFATIFGLLSKFKLGRTLLLNYPGLFSGGLA 316
            |:::..:.|||..||.|.      ||:      :....:|.||:....||.||:.||..||.|..
Zfish   266 LHEELNETPVQYGAYAGI------GGISNVFKFLISGFMFCLLALCSCGRKLLIKYPEFFSFGFF 324

  Fly   317 SRSGPSEESMERTYFKMTFKASGWLKSDRLAESSNQYTESPTKTLMVRVSGMNPGYGATCVAVLS 381
            |..||:::.:|...|.:.|...|:.|....::.      .|...:...|.|...||..|.:|::.
Zfish   325 STEGPTKKQIEDASFHILFFGDGYTKGQDPSKG------KPNGKIRTEVKGPEAGYVTTPIAMVQ 383

  Fly   382 AALTILRESDKMPSTGGVLPPAAAFSKTGLISELEKHDHGIKFEIL 427
            ||:|:|.|.|.:|.||||..|.|.|:||.||..|.|  |||:|.::
Zfish   384 AAITMLNEPDSLPQTGGVYTPGATFAKTTLIKRLNK--HGIEFSVI 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sccpdh1NP_649517.1 COG3268 7..426 CDD:225807 183/433 (42%)
Sacchrp_dh_NADP 8..139 CDD:281434 69/140 (49%)
sccpdha.1NP_001002359.1 COG3268 10..424 CDD:225807 182/431 (42%)
Sacchrp_dh_NADP 14..152 CDD:281434 69/140 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590395
Domainoid 1 1.000 202 1.000 Domainoid score I2937
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9334
Inparanoid 1 1.050 332 1.000 Inparanoid score I2409
OMA 1 1.010 - - QHG56565
OrthoDB 1 1.010 - - D302978at33208
OrthoFinder 1 1.000 - - FOG0002586
OrthoInspector 1 1.000 - - mtm6482
orthoMCL 1 0.900 - - OOG6_101495
Panther 1 1.100 - - LDO PTHR12286
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4081
SonicParanoid 1 1.000 - - X1697
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.900

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