DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sccpdh1 and Sccpdh2

DIOPT Version :9

Sequence 1:NP_649517.1 Gene:Sccpdh1 / 40623 FlyBaseID:FBgn0037298 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_650190.1 Gene:Sccpdh2 / 41521 FlyBaseID:FBgn0038038 Length:431 Species:Drosophila melanogaster


Alignment Length:431 Identity:302/431 - (70%)
Similarity:363/431 - (84%) Gaps:1/431 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGDRLDVIIFGASGFTGKYTVFEAVTVLRGLRWGIAGRNREKLEAVLKEMGAKAKKDLSQVPIF 65
            |:..:||.||||||||||||||||||:||:||:|||||||:|||::||:|||||:|.||||.||.
  Fly     1 MAAKKLDAIIFGASGFTGKYTVFEAVSVLKGLQWGIAGRNQEKLQSVLREMGAKSKTDLSQTPIV 65

  Fly    66 IADVNDQASLLEMAKKCRIVVNTAGPYRFHGENVVKCCIESGTHHVDVSGEPQYMETMQLRYDQL 130
            |||||::||||||||:|||:|||||||||.||.||:.|||:|||||||||||||||||||||..|
  Fly    66 IADVNNEASLLEMAKRCRILVNTAGPYRFFGERVVRACIEAGTHHVDVSGEPQYMETMQLRYHDL 130

  Fly   131 AREKGVYVVSACGFDSIPADMGVVFVEKNFDGVVNSVETFLETGIKEGGSGGGTAGLNYGTWESA 195
            |:|:||||:||||||||||||||.||||||||||||||.|:..|:|.|..|.|:|.||.||||||
  Fly   131 AKERGVYVISACGFDSIPADMGVTFVEKNFDGVVNSVENFVHLGVKGGTKGTGSAALNTGTWESA 195

  Fly   196 VYGLAHSDELRGIRKQIYPQRLPRFYPFLKPRPLVFRSTEVD-KVCLPFPGSDRSVVMRSQRFLY 259
            ::.:|:..|...||::::|:|||.|:|.||.|..:.|:.||| ||.||||.:|||||||||||||
  Fly   196 IHAIANRSESVAIRRKLFPERLPNFHPALKSRSPLSRAAEVDNKVILPFPETDRSVVMRSQRFLY 260

  Fly   260 DQDKKRPVQMQAYVGFSSWLVAGGVIFFATIFGLLSKFKLGRTLLLNYPGLFSGGLASRSGPSEE 324
            :.:||||||||||:.:.||..|..|:.||:|.|:::||..||.|||.||.:||||:|||.||||.
  Fly   261 ELEKKRPVQMQAYMTYPSWFAASVVVLFASIIGIMAKFSFGRQLLLKYPTVFSGGMASREGPSEA 325

  Fly   325 SMERTYFKMTFKASGWLKSDRLAESSNQYTESPTKTLMVRVSGMNPGYGATCVAVLSAALTILRE 389
            .|||::|:||.||:||.||::|||:::|||..|||||.|||:|.|||||:||||:||.|.|||.|
  Fly   326 RMERSFFRMTMKATGWPKSEKLAETTDQYTSPPTKTLTVRVTGPNPGYGSTCVALLSTAKTILNE 390

  Fly   390 SDKMPSTGGVLPPAAAFSKTGLISELEKHDHGIKFEILANK 430
            |||||.:||||||.|||..|.||||||||:|||||||:|||
  Fly   391 SDKMPGSGGVLPPGAAFRGTSLISELEKHEHGIKFEIVANK 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sccpdh1NP_649517.1 COG3268 7..426 CDD:225807 295/419 (70%)
Sacchrp_dh_NADP 8..139 CDD:281434 105/130 (81%)
Sccpdh2NP_650190.1 COG3268 7..416 CDD:225807 285/408 (70%)
Sacchrp_dh_NADP 9..139 CDD:281434 105/129 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461649
Domainoid 1 1.000 125 1.000 Domainoid score I1791
eggNOG 1 0.900 - - E1_COG3268
Homologene 1 1.000 - - H9334
Inparanoid 1 1.050 222 1.000 Inparanoid score I1197
Isobase 1 0.950 - 0 Normalized mean entropy S4069
OMA 1 1.010 - - QHG56565
OrthoDB 1 1.010 - - D302978at33208
OrthoFinder 1 1.000 - - FOG0002586
OrthoInspector 1 1.000 - - mtm6482
orthoMCL 1 0.900 - - OOG6_101495
Panther 1 1.100 - - P PTHR12286
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4081
SonicParanoid 1 1.000 - - X1697
1514.790

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