DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sccpdh1 and Y50D4B.2

DIOPT Version :9

Sequence 1:NP_649517.1 Gene:Sccpdh1 / 40623 FlyBaseID:FBgn0037298 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001300266.1 Gene:Y50D4B.2 / 190094 WormBaseID:WBGene00021741 Length:251 Species:Caenorhabditis elegans


Alignment Length:430 Identity:79/430 - (18%)
Similarity:127/430 - (29%) Gaps:196/430 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RLDVIIFGASGFTGKYTV--------FEAVTVLRGLRWGIAGRNREKLEAVLKEMGAKAKKDLSQ 61
            |.||:::||:||||.:.|        |:.:::      .:||||.:||..||:.:|.|.:|:|. 
 Worm     4 RFDVVVYGATGFTGTFIVERMIKSQFFDDLSI------AVAGRNEKKLREVLRIVGEKTEKELQ- 61

  Fly    62 VPIFIADVNDQASLLEMAKKCRIVVNTAGPYRFHGENVVKCCIESGTHHVDVSGEPQYMETMQLR 126
                                                                             
 Worm    62 ----------------------------------------------------------------- 61

  Fly   127 YDQLAREKGVYVVSACGFDSIPADMGVVFVEKNFDGVVNSVETFLETGIKEGGSGGGTAGLNYGT 191
                            ||                                               
 Worm    62 ----------------GF----------------------------------------------- 63

  Fly   192 WESAVYGLAHSDELRGIRKQIYPQRLPRFYPFLKPRPLVFRSTEVDKVCLPFPGSDRSVVMRSQR 256
                                                            .:||||:|.||::|||.
 Worm    64 ------------------------------------------------AIPFPGADLSVMVRSQY 80

  Fly   257 FLYDQDKKRPVQMQAYVGFSSWLVAGGVIFFATIFGLLSKFKLGRTLLLNYPGLFSGGLASRSGP 321
            :.....|.|||.:.:|....:......:|.:..|....:.....|.:||.||...|..:..:|||
 Worm    81 YDATVRKSRPVHLSSYFQLDTRFKTYRLILWGAITRAFALASFTRRILLKYPDQCSFRMFKKSGP 145

  Fly   322 SEESMERTYFKMTFKASGWLKSDRLAESSNQYTESPTKTLMVRVSGMNPGYGATCVAVLSAALTI 386
            |.:.:....|...|...|:.::..|   ..|:.....:.::....|.:..|.|....||||||.:
 Worm   146 SAQQIAEASFTYWFFGYGYKETIPL---DQQHERKVDRKVVATCKGPDLAYMAASGCVLSAALAL 207

  Fly   387 LRESDKMPSTGGVLPPAAAFSKTGLISELEKHDHGIKFEI 426
            :::.:.:|..|||..|||||..:.:...|.  ..||.|.:
 Worm   208 VKDKNNLPKEGGVYTPAAAFGDSKIYDYLA--TFGINFHL 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sccpdh1NP_649517.1 COG3268 7..426 CDD:225807 78/426 (18%)
Sacchrp_dh_NADP 8..139 CDD:281434 21/138 (15%)
Y50D4B.2NP_001300266.1 NADB_Rossmann 7..>61 CDD:304358 20/59 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163996
Domainoid 1 1.000 153 1.000 Domainoid score I2624
eggNOG 1 0.900 - - E1_COG3268
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H9334
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D302978at33208
OrthoFinder 1 1.000 - - FOG0002586
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101495
Panther 1 1.100 - - O PTHR12286
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1697
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.710

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