DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2604 and Sccpdh

DIOPT Version :10

Sequence 1:NP_649517.1 Gene:CG2604 / 40623 FlyBaseID:FBgn0037298 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_848768.1 Gene:Sccpdh / 109232 MGIID:1924486 Length:429 Species:Mus musculus


Alignment Length:436 Identity:174/436 - (39%)
Similarity:256/436 - (58%) Gaps:33/436 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VIIFGASGFTGKYTVFE------AVTVLRGLRWGIAGRNREKLEAVLKEMGAKAKKD--LSQVPI 64
            :::||||||||::...|      |......|.|.:|||::|||:.||::...|..:.  .|:|.:
Mouse    10 LVVFGASGFTGQFVTEEVAREQIASEQSSRLPWAVAGRSKEKLQQVLEKAAQKLGRPSLSSEVGV 74

  Fly    65 FIADVNDQASLLEMAKKCRIVVNTAGPYRFHGENVVKCCIESGTHHVDVSGEPQYMETMQLRYDQ 129
            .|.|:::.|||.||||:.::|:|..|||||:||.|||.|||:||..:|:.||||::|.|..:|.:
Mouse    75 IICDISNPASLDEMAKQAKLVLNCVGPYRFYGEPVVKACIENGTSCIDICGEPQFLELMHAKYHE 139

  Fly   130 LAREKGVYVVSACGFDSIPADMGVVFVEKNFDGVVNSVETFLETGIKEGGSGGGTAGLNYGTWES 194
            .|.|||||::.:.||||||||:||::.....:|.:.:||:||.  |..|..|   ..::.|||:|
Mouse   140 KAAEKGVYIIGSSGFDSIPADLGVLYTRNQMNGTLTAVESFLT--INTGPEG---LCIHDGTWKS 199

  Fly   195 AVYGLAHSDELRGIRKQIYPQRLPRFYPFLKPRPLVFRSTEVDKVCLPFPGSDRSVVMRSQRFLY 259
            |:||......||.:|.....:.:|.....||.|..|....|::...:||.|||.|||.|:||:|:
Mouse   200 AIYGFGDKGSLRKLRSVSCLKPVPIVGTKLKRRWPVSYCRELNSYSIPFLGSDISVVKRTQRYLH 264

  Fly   260 DQDKKRPVQMQAYVGFSSWLVAGGV-----IFFATIFGL-LSKFKLGRTLLLNYPGLFSGGLASR 318
            :..:..|||..|||      ..||:     :.||.:|.| ..||.:||.||:.:|.|||.|..|:
Mouse   265 ENLEDSPVQYAAYV------TVGGITSVIKLMFAGLFFLFFVKFSIGRQLLIKFPWLFSFGYFSK 323

  Fly   319 SGPSEESMERTYFKMTFKASGWLKSDRLAESSNQYTESPTKTLMVRVSGMNPGYGATCVAVLSAA 383
            .||:::.|:.|.|.|||...|:  |.......|:    |...:..:|.|...||.||.:|::.||
Mouse   324 QGPTQKQMDETSFTMTFFGQGY--SHGTCVEKNK----PNIRICTQVKGPEAGYVATPIAMVQAA 382

  Fly   384 LTILRESDKMPSTGGVLPPAAAFSKTGLISELEKHDHGIKFEILAN 429
            :|.|.::..:|..|||..|.||||:|.||..|.|  |||:|.::::
Mouse   383 MTFLSDASDLPKGGGVFTPGAAFSRTKLIDRLNK--HGIEFSVISS 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2604NP_649517.1 COG3268 1..428 CDD:442499 174/433 (40%)
SccpdhNP_848768.1 COG3268 1..425 CDD:442499 174/433 (40%)

Return to query results.
Submit another query.