DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sccpdh1 and sccpdh

DIOPT Version :9

Sequence 1:NP_649517.1 Gene:Sccpdh1 / 40623 FlyBaseID:FBgn0037298 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_002931533.2 Gene:sccpdh / 100379674 XenbaseID:XB-GENE-940936 Length:429 Species:Xenopus tropicalis


Alignment Length:436 Identity:184/436 - (42%)
Similarity:261/436 - (59%) Gaps:34/436 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VIIFGASGFTGKYTVFEAVTVL-------RGLRWGIAGRNREKLEAVLKEMGAKAKKD--LSQVP 63
            ::|.|||||||::.|.|.....       .||||.:||||::|||.||:....:..|.  .|.|.
 Frog     9 LVILGASGFTGQFVVEEVARAADSEDFRGPGLRWAVAGRNKKKLEEVLQTASQRLSKPQLKSDVD 73

  Fly    64 IFIADVNDQASLLEMAKKCRIVVNTAGPYRFHGENVVKCCIESGTHHVDVSGEPQYMETMQLRYD 128
            |.:.||:|..||.||.||..:|::..|||||:||.|||.|:|:|.|.||:|||||::|.|.|:|:
 Frog    74 IILCDVSDPPSLAEMCKKATVVLDCVGPYRFYGEPVVKACVENGAHFVDISGEPQFLEGMYLKYN 138

  Fly   129 QLAREKGVYVVSACGFDSIPADMGVVFVEKNFDGVVNSVETFLETGIKEGGSGGGTAGLNYGTWE 193
            ..|.|||||:|.:.||||||||:||:|...:..|.:.:||:||  .:|.|..|   ..::.|||:
 Frog   139 SQAAEKGVYIVGSSGFDSIPADLGVLFTRNSLKGTLTAVESFL--SLKSGPKG---TCIHDGTWQ 198

  Fly   194 SAVYGLAHSDELRGIRKQIYPQRLPRFYPFLKPRPLVFRSTEVDKVCLPFPGSDRSVVMRSQRFL 258
            |||:|:|....||.:|||:..:.||.....:|.|..||.|.|:.:..:||.|:|.|||.|:||:|
 Frog   199 SAVHGIADEGNLRKLRKQLAYKPLPVVGKKMKRRGPVFYSNELKEYAIPFLGADASVVRRTQRYL 263

  Fly   259 YDQDKKRPVQMQAYVGFSSWLVAGGV-----IFFATIFGLL-SKFKLGRTLLLNYPGLFSGGLAS 317
            |:..::.|||..|||.      .||:     :.||.:|.|| :||..||.||:.:|..||.|..|
 Frog   264 YENLQESPVQYAAYVS------VGGLTSVIKLMFAGLFFLLFTKFSCGRKLLIKFPKFFSFGYFS 322

  Fly   318 RSGPSEESMERTYFKMTFKASGWLKSDRLAESSNQYTESPTKTLMVRVSGMNPGYGATCVAVLSA 382
            :.||::|.|:...|.|||...|:      ::..|....:|...:..:|||....|.||.:|::..
 Frog   323 KEGPTQEQMDGASFTMTFFGEGY------SQGYNPQDGTPNVKICTQVSGPEVAYVATPIAMVQT 381

  Fly   383 ALTILRESDKMPSTGGVLPPAAAFSKTGLISELEKHDHGIKFEILA 428
            .:|||::|..:|.:|||..|.||||||.||..|.|  .|:.|.:::
 Frog   382 GVTILKDSSLLPKSGGVYTPGAAFSKTKLIERLNK--AGLHFTVIS 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sccpdh1NP_649517.1 COG3268 7..426 CDD:225807 184/432 (43%)
Sacchrp_dh_NADP 8..139 CDD:281434 68/139 (49%)
sccpdhXP_002931533.2 COG3268 1..422 CDD:225807 183/431 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 190 1.000 Domainoid score I3204
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H9334
Inparanoid 1 1.050 323 1.000 Inparanoid score I2463
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D302978at33208
OrthoFinder 1 1.000 - - FOG0002586
OrthoInspector 1 1.000 - - otm48730
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1697
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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