DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1116 and RGP1

DIOPT Version :10

Sequence 1:NP_730894.2 Gene:CG1116 / 40622 FlyBaseID:FBgn0037297 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001073965.2 Gene:RGP1 / 9827 HGNCID:21965 Length:391 Species:Homo sapiens


Alignment Length:447 Identity:156/447 - (34%)
Similarity:225/447 - (50%) Gaps:81/447 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIEIKAKLLRADSAIYATGERVQCLIEFTHKVFSDEPAASQAVHNANEARSQENLAWASAQLHCY 65
            |||:.|:|.|  ..::..||.::|::..|:.:   .|.|:.|        |.|.|||||||:||.
Human     1 MIEVVAELSR--GPVFLAGEALECVVTVTNPL---PPTATSA--------SSEALAWASAQIHCQ 52

  Fly    66 RKTSYSTSA---GDRAAELTEMIGRTALDAVTQAPGEVIVATKPKILFCDLRLQPGETKMYFFNE 127
            ...|.|..|   .|.:....:...:|.........|:.|::|.||||||||||.|||:|.|.::|
Human    53 FHASESRVALPPPDSSQPDVQPDSQTVFLPHRGERGQCILSTPPKILFCDLRLDPGESKSYSYSE 117

  Fly   128 FIPRDGPPTYRGHNIRYFYKITIATQRVKSKVQTLAVPIRVLPIPIISRPDELPVTVETNEELAP 192
            .:|.:|||::||.:::|.||:||..|||.|.:..|.||:|||.:..:.     .|....:|.:||
Human   118 VLPIEGPPSFRGQSVKYVYKLTIGCQRVNSPITLLRVPLRVLVLTGLQ-----DVRFPQDEAVAP 177

  Fly   193 TNPFLE-----KREISELEISWHHLKNVTARRAPKFYRISNKRGFVGRFCLFKPAYKLGEDIVGS 252
            ::||||     |::....|::...|...|:.|:...|.||:.||.||.|.:||..|:||||:||:
Human   178 SSPFLEEDEGGKKDSWLAELAGERLMAATSCRSLHLYNISDGRGKVGTFGIFKSVYRLGEDVVGT 242

  Fly   253 LDFDPGVNPRKVRCVQFSVKLQQQELSIRPQPVQNHQLQSQSSTGDDVSSMNSFDMASIASGVLA 317
            |:...|.    |.|:||||.||.:|   |.||      :.|...|              |.||  
Human   243 LNLGEGT----VACLQFSVSLQTEE---RVQP------EYQRRRG--------------AGGV-- 278

  Fly   318 DNLHKSATSASSKVKEAPEPTGKLSTISTSHQVCYATLQTQVVVPIPLHVTPTFRTDLVDVRWRL 382
                               |:....|.:...:.|..|.:|...:||||..||.|.|.:|.::|||
Human   279 -------------------PSVSHVTHARHQESCLHTTRTSFSLPIPLSSTPGFCTAIVSLKWRL 324

  Fly   383 HFEFVTT-----TLIDFGIPNPESGELKAPSEMPVETMVWNLPVTVYAANP-LQIYA 433
            ||||||:     .|:. .:..||......|.::||:|..|:||:.|...:| |..||
Human   325 HFEFVTSREPGLVLLP-PVEQPEPTTWTGPEQVPVDTFSWDLPIKVLPTSPTLASYA 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1116NP_730894.2 Rgp1 <101..388 CDD:430181 109/291 (37%)
RGP1NP_001073965.2 Rgp1 <91..330 CDD:430181 109/291 (37%)

Return to query results.
Submit another query.