DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1116 and RGP1

DIOPT Version :10

Sequence 1:NP_730894.2 Gene:CG1116 / 40622 FlyBaseID:FBgn0037297 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_010421.1 Gene:RGP1 / 851714 SGDID:S000002544 Length:663 Species:Saccharomyces cerevisiae


Alignment Length:546 Identity:91/546 - (16%)
Similarity:165/546 - (30%) Gaps:231/546 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 AVHNANEARSQENLAWASAQLHCYRKTSYS--------TSAGDRAAELTEMIGRTAL--DAVTQA 96
            |:.:....:.:.||.       .|..:.|:        :.:|.|        |||..  :.....
Yeast   179 ALEDGEHFKGKRNLT-------NYLNSDYTNVTNGLLFSESGSR--------GRTGTYNERTLMI 228

  Fly    97 PGEVIVATKP------KILFCDLRLQPGETKMYFFNEF-IPRDGPPTYRGHNIRYF-YKITIATQ 153
            ..:..:.|.|      .:||.::.|:|||.:.::|... :|:|..|:|....:... |.:.:...
Yeast   229 SNDTSIKTLPLLLIPQTLLFSEISLEPGEVRTFYFKSTKLPKDICPSYSSSKVASINYTLEVGAD 293

  Fly   154 RVK-SKVQTLA--VPIRVLPI------PIISRPDELPVTVETN--EELAP--------------- 192
            .:. ..::..:  |||.:.|.      ...||.|:..:.::|.  :||.|               
Yeast   294 VLSDDNIEKFSNRVPITIAPYISSNAEQYTSRLDKPAIILKTGNIKELKPRLFTRKVSTASAVSF 358

  Fly   193 ---------------TNPFLEK----------------REISEL------------------EIS 208
                           .|.|:::                |:|.||                  |.:
Yeast   359 GRRKSSIIDIDSPLEDNEFVKRVKKNFIELVESNQNVSRDIDELIDLQMGVQFGKDEDSSDPEPN 423

  Fly   209 WHHLKN--------------VTARR-------------------------------APKF----- 223
            ..|..|              ||.||                               .|:.     
Yeast   424 DSHFSNEMVTSAESSLRSDAVTKRRKSYSVRDNISNLEQKMWNDCSLVKSDENSNLLPQLINLQN 488

  Fly   224 -YRISNKRGFVGRFCLFKPAYKLGEDIVGSLDFDPGVNPRKVRCVQFSVKLQQQELSIRPQPVQN 287
             |:|:.....:.:..|..|.||..:||...::.||...| .::....:|.|:..|: |.|:    
Yeast   489 AYQINRNNETMAKVSLSAPFYKTTDDINLVIELDPITTP-LLKVTSLTVSLESFEI-INPK---- 547

  Fly   288 HQLQSQSSTGDDVSSMNSFDMASIASGVLADNLHKSATSASSKVKEAPEPTGKLSTISTSHQVCY 352
                 ..:.|..:.|                                 :|.|  :::...|.:|:
Yeast   548 -----YKTEGKGIGS---------------------------------KPKG--NSVYEKHFICF 572

  Fly   353 ATLQTQVVVPIP-----LHVTPTFRTDLVDVRWRLHFEFV------TTTLIDF-----GI----- 396
            ...::..|..:|     ..:|..|:||:...:|.:..:||      :.||..|     ||     
Yeast   573 DECKSVSVKLLPPRSPTNQITGQFKTDVFQHKWMIGLKFVIIAKTESITLDQFYEDKKGILFHSK 637

  Fly   397 PNPESGELKAPSEMPV-----ETMVW 417
            .|.|..|......:|:     :.|.|
Yeast   638 ENLEGEEFTCYVPIPILCTSEDFMGW 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1116NP_730894.2 Rgp1 <101..388 CDD:430181 70/431 (16%)
RGP1NP_010421.1 Rgp1 132..614 CDD:430181 80/495 (16%)

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