DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1116 and rgp1

DIOPT Version :9

Sequence 1:NP_730894.2 Gene:CG1116 / 40622 FlyBaseID:FBgn0037297 Length:443 Species:Drosophila melanogaster
Sequence 2:XP_031755138.1 Gene:rgp1 / 496821 XenbaseID:XB-GENE-997629 Length:457 Species:Xenopus tropicalis


Alignment Length:459 Identity:144/459 - (31%)
Similarity:216/459 - (47%) Gaps:118/459 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIEIKAKLLRADSAIYATGERVQCLIEFTHKVFSDEPAASQAVHNANEARSQENLAWASAQLHCY 65
            |||:.|||.|  ..::..||.::|::.|::.:.:...:|           |.|.|||||||:||.
 Frog    71 MIEVVAKLGR--GPVFLAGEVLECVVSFSNPLSALSTSA-----------SSETLAWASAQIHCQ 122

  Fly    66 RKTSYS---TSAGDRAAELTEMIGRTALDAVTQAPGEVIVATKPKILFCDLRLQPGETKMYFFNE 127
            ...|.|   ..|.:...:..:....|.........|:.|::|.||||||||||.|||:|.|.::|
 Frog   123 FHASESRVHLPANEEPRQDVQAENETVFVPNRGERGQCILSTPPKILFCDLRLDPGESKSYSYSE 187

  Fly   128 FIPRDGPPTYRGHNIRYFYKITIATQRVKSKVQTLAVPIRVLPIPIISR---PDELPVTVETNEE 189
            .:|...||::||.:::|.||:||..|||...:|.|.||.|||.:..:..   |.|        :|
 Frog   188 SLPLAAPPSFRGQSVKYVYKLTIGCQRVNCPIQLLRVPFRVLLLHALQNFQPPQE--------DE 244

  Fly   190 LAPTNPFLE-----KREISELEISWHHLKNVTARRAPKFYRISNKRGFVGRFCLFKPAYKLGEDI 249
            :||:||||:     |::...|:.:...|..:|:||....:.|||.||.||.||:||..||:|||:
 Frog   245 VAPSNPFLDEEGGGKKDSRLLDSAVEILMALTSRRTLHQFNISNSRGRVGTFCIFKTVYKIGEDV 309

  Fly   250 VGSLDFDPGVNPRKVRCVQFSVKLQQQELSIRPQPVQNHQLQSQSSTGDDVSSMNSFDMASIASG 314
            :|:..|..|    ::.|:|:||.||.:|      .||....:|::                    
 Frog   310 IGTFSFSDG----EIPCLQYSVLLQTEE------SVQEEYRRSRA-------------------- 344

  Fly   315 VLADNLHKSATSASSKVKEAPEPTGKLSTISTSHQVCYATLQTQVVVPIPLHVTPTFRTDLVDVR 379
                                 :|. .::|.:..|:.|..:..|...:||||...|.|.|::|.::
 Frog   345 ---------------------QPV-SVTTHAQHHESCLHSAGTNFSLPIPLTSCPGFSTNIVSLK 387

  Fly   380 WRLHFEFVTTTLIDFGIPNPESGELKAPSEMP-------------------VETMVWNLPVTVYA 425
            |||||||||:               :.|.|.|                   |:|..|:||:.|..
 Frog   388 WRLHFEFVTS---------------REPVEAPTVPENQSEIITWTGAGQIEVDTFSWDLPIKVLP 437

  Fly   426 ANPL 429
            .|||
 Frog   438 TNPL 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1116NP_730894.2 Rgp1 <101..388 CDD:285895 102/294 (35%)
rgp1XP_031755138.1 Rgp1 <161..397 CDD:400883 103/295 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 87 1.000 Domainoid score I7908
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I3580
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005628
OrthoInspector 1 1.000 - - oto102387
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5274
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.050

Return to query results.
Submit another query.