Protein Alignment CG1116 and rgp1

DIOPT Version :10

• Sequence 1: NP_730894.2
• Gene: CG1116 / 40622
• FlyBaseID: FBgn0037297
• Length: 443
• Species: Drosophila melanogaster
• Sequence 2: NP_596608.1
• Gene: rgp1 / 2540531
• PomBaseID: SPBC23E6.08
• Length: 550
• Species: Schizosaccharomyces pombe
• Alignment Length: 242
• Identity: 51/242 - (21%)
• Similarity: 97/242 - (40%)
• Gaps: 51/242 - (21%)

  Fly    15 IYATGERVQCLIEFTHKVFSDEP---AASQAVHNA-------------NEARSQE--NLAWASAQ 61
            :..:|...:|:::||:...|::.   ....::|..             :|.:.|.  |....|..
pombe    14 VVQSGTDFECIVKFTNLRSSEDVNLLLCYASIHGEMYLDYVLVRVTEFDEVQRQGLLNKRTMSGL 78

  Fly    62 LHCYR-KTSYS---TSAG--------DRAAELTEMIGRTALDAVTQAPGEVIVATKPKILFCDLR 114
            :|..: .:|||   |..|        .:|:.|||...:...:|:.      ::.|:|.||..|:.
pombe    79 VHIPKVSSSYSVINTLNGMIGNLFGVKQASTLTEASEQKQENAIP------VLLTRPDILGVDIT 137

  Fly   115 LQPGETKMYFFNEFIPRDGPPTYRGHNIRYFYKITIATQRVKSKVQTLAVPIRVLPIPIISRPDE 179
            |.|||.|.:.....||....|||:|...|:.:.:.|..|...:.. .:.....:..:|.:.:..|
pombe   138 LSPGEEKCFRLKRRIPLRTAPTYKGLAFRFQHALVIGVQSATNNA-CVEHEFEITIVPNVQQQPE 201

  Fly   180 LPVTVETNEELAP------TNPFLEKREISELEISWHHLKNVTARRA 220
            ||:...:....:.      :.|.:| .:.:|:|       .|:|.:|
pombe   202 LPLGKNSGNRQSSKLFADLSKPIIE-TDAAEIE-------EVSAEKA 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1116	NP_730894.2	Rgp1	<101..388	CDD:430181	30/126 (24%)
rgp1	NP_596608.1	Rgp1	37..435	CDD:430181	46/219 (21%)